RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 GAL3ST4Q96RP7 486 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 BRINP2Q9C0B6 783 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OR10A5Q9H207 317 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 LRTM1Q9HBL6 345 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 PFDN4Q9NQP4 134 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SLC35C2Q9NQQ7 365 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 C1orf109Q9NX04 203 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 MAT2BQ9NZL9 334 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 EHD3Q9NZN3 535 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 SEC14L3Q9UDX4 400 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 HECTD1Q9ULT8 2610 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 OSGIN2Q9Y236 505 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 POLR3HQ9Y535 204 aaPredicted RBP8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ACTL7BQ9Y614 415 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 ZGRF1Q86YA3 2104 aa8.5□□□□□ -1.05
DNMT1-223ENST00000591239 CROCCQ5TZA2 2017 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 USP9YO00507 2555 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 C2orf92A0A1B0GVN3 265 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 WDR91A4D1P6 747 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 NPIPB8E9PQR5 432 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 LSM1O15116 133 aaKnown RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 BIRC5O15392 142 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 UNC5CO95185 931 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZWINTO95229 277 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 NADKO95544 446 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 MYZAPP0CAP1 466 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 NEFHP12036 1026 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF24P17028 368 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 DDCP20711 480 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 SOX18P35713 384 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 MEOX1P50221 254 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 NR0B1P51843 470 aaKnown RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 MPP2Q14168 576 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 EXOSC7Q15024 291 aaKnown RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 LTB4RQ15722 352 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF791Q3KP31 576 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 KRTCAP3Q53RY4 240 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 CES4AQ5XG92 561 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 HLA-DQA1Q5Y7H0 255 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 FAM71E1Q6IPT2 247 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 FAM111BQ6SJ93 734 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 LYPD8Q6UX82 237 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 RTL4Q6ZR62 310 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 SIAH3Q8IW03 269 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 DDIASQ8IXT1 998 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF441Q8N8Z8 693 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 GOLM1Q8NBJ4 401 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 C16orf52Q8NHV5 167 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 PPP1R14CQ8TAE6 165 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 TWIST2Q8WVJ9 160 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ADIPOR1Q96A54 375 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 TP53INP1Q96A56 240 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 CTHRC1Q96CG8 243 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 EGLN2Q96KS0 407 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 STMN4Q9H169 189 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 TSPAN10Q9H1Z9 355 aaPredicted RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 KCNK9Q9NPC2 374 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 MYNNQ9NPC7 610 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 DEPPQ9NTK1 212 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 GIMAP4Q9NUV9 329 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF639Q9UID6 485 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ZDHHC2Q9UIJ5 367 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 ENTPD4Q9Y227 616 aa8.49□□□□□ -1.05
DNMT1-223ENST00000591239 WBP11Q9Y2W2 641 aaKnown RBP8.49□□□□□ -1.05
DNMT1-223ENST00000591239 PTPN13Q12923 2485 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 NPIPA5E9PKD4 350 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 PIP5K1BO14986 540 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 ASNA1O43681 348 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 CBX7O95931 251 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 P04436 131 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 SERPINE1P05121 402 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 STSP08842 583 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 FBXO45P0C2W1 286 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 DHRS4L1P0CG22 281 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 CCL3P10147 92 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 PCSK2P16519 638 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 CNR1P21554 472 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 TACR1P25103 407 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 MPIP34949 423 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 RFC3P40938 356 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 MRPS35P82673 323 aaKnown RBP8.48□□□□□ -1.05
DNMT1-223ENST00000591239 DUSP8Q13202 625 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 CEBPEQ15744 281 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 CHI3L2Q15782 390 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 PRSS53Q2L4Q9 553 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 GALNTL6Q49A17 601 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 RFTN2Q52LD8 501 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-223ENST00000591239 TRMT12Q53H54 448 aaKnown RBP8.48□□□□□ -1.05
DNMT1-223ENST00000591239 SLC22A10Q63ZE4 541 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 IKBIPQ70UQ0 350 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 TICAM1Q8IUC6 712 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 DND1Q8IYX4 353 aaKnown RBP8.48□□□□□ -1.05
DNMT1-223ENST00000591239 TAGAPQ8N103 731 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 ZFP62Q8NB50 900 aaPredicted RBP8.48□□□□□ -1.05
DNMT1-223ENST00000591239 SIMC1Q8NDZ2 872 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 C17orf47Q8NEP4 570 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 OR2M7Q8NG81 312 aa8.48□□□□□ -1.05
DNMT1-223ENST00000591239 ZNF675Q8TD23 568 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms