RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 SNX4O95219 450 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 GBAP04062 536 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 LTA4HP09960 611 aaKnown RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 PTX3P26022 381 aaPredicted RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 HOXC12P31275 282 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 SPRP35270 261 aaPredicted RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 CASP3P42574 277 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 SLCO1A2P46721 670 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 NEK2P51955 445 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 NAGLUP54802 743 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 SETDB1Q15047 1291 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 KBTBD12Q3ZCT8 623 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 WIPI1Q5MNZ9 446 aaPredicted RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 GRTP1Q5TC63 336 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 LIPJQ5W064 366 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 DESI1Q6ICB0 168 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 MYLK4Q86YV6 388 aaPredicted RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 CTAGE3PQ8IX95 158 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 PRR22Q8IZ63 422 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 C9orf106Q8NAJ2 232 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 WDR20Q8TBZ3 569 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 HSPBAP1Q96EW2 488 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 TRIB1Q96RU8 372 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 SECISBP2Q96T21 854 aaKnown RBP14.77□□□□□ -0.05
RAB3D-202ENST00000589655 DPH5Q9H2P9 285 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 SNX15Q9NRS6 342 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 DTX4Q9Y2E6 619 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 PCDHGA11Q9Y5H2 935 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 DNHD1Q96M86 4753 aa14.77□□□□□ -0.05
RAB3D-202ENST00000589655 EIF3HO15372 352 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB3D-202ENST00000589655 S1PR1P21453 382 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 CTSSP25774 331 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 PTPN6P29350 595 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 IRF9Q00978 393 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 FOXF2Q12947 444 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 CUL3Q13618 768 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 SLMAPQ14BN4 828 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 CPSF6Q16630 551 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB3D-202ENST00000589655 RAPH1Q70E73 1250 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 Q71RC1 249 aaPredicted RBP14.76□□□□□ -0.05
RAB3D-202ENST00000589655 GALNT12Q8IXK2 581 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 PM20D2Q8IYS1 436 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 PPM1NQ8N819 430 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 KCTD4Q8WVF5 259 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 LRRC46Q96FV0 321 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 TMEM41AQ96HV5 264 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 CENPKQ9BS16 269 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 ACTR8Q9H981 624 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 EDARQ9UNE0 448 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 RNF11Q9Y3C5 154 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 SAR1BQ9Y6B6 198 aa14.76□□□□□ -0.05
RAB3D-202ENST00000589655 FN1P02751 2386 aaKnown RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 HMX2A2RU54 273 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 EEF1E1-BLOC1S5C9J1V9 151 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 GNB5O14775 395 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 EEF1E1O43324 174 aaKnown RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 HRGP04196 525 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 ABCB1P08183 1280 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 DRD2P14416 443 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 ABCD3P28288 659 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PTGDSP41222 190 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PIK3CGP48736 1102 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 MASP1P48740 699 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 SORDQ00796 357 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 LTBQ06643 244 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 KEAP1Q14145 624 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PFKFB4Q16877 469 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 TIGD3Q6B0B8 471 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 OR52E8Q6IFG1 317 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 CYP20A1Q6UW02 462 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PLXDC2Q6UX71 529 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 TBC1D1Q86TI0 1168 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 YRDCQ86U90 279 aaKnown RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PACS2Q86VP3 889 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 KIF18BQ86Y91 864 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 L3MBTL4Q8NA19 623 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 FAM83FQ8NEG4 500 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 ABTB1Q969K4 478 aaPredicted RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 ERP44Q9BS26 406 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 NXF5Q9H1B4 397 aaKnown RBP14.75□□□□□ -0.05
RAB3D-202ENST00000589655 OR10A5Q9H207 317 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 CALHM2Q9HA72 323 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 PSD3Q9NYI0 1048 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 WHRNQ9P202 907 aa14.75□□□□□ -0.05
RAB3D-202ENST00000589655 CLCA1A8K7I4 914 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 CAPN14A8MX76 684 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 UGDHO60701 494 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 SIX3O95343 332 aaPredicted RBP14.74□□□□□ -0.05
RAB3D-202ENST00000589655 IL18BPO95998 194 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 GSTA2P09210 222 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 CD53P19397 219 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 GPX3P22352 226 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 CRABP2P29373 138 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 OPRM1P35372 400 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 GNG11P61952 73 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 PCBP2Q15366 365 aaKnown RBP eCLIP14.74□□□□□ -0.05
RAB3D-202ENST00000589655 HLA-DQA1Q5Y7H0 255 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 GOLGA7Q7Z5G4 137 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 BIVMQ86UB2 503 aa14.74□□□□□ -0.05
RAB3D-202ENST00000589655 NUDT13Q86X67 352 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms