RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 ANXA11P50995 505 aaKnown RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 RPS26P62854 115 aaKnown RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 OCA2Q04671 838 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ADRM1Q16186 407 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 VMACQ2NL98 169 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ZNF628Q5EBL2 1059 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 CEACAM20Q6UY09 585 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ZC3H7AQ8IWR0 971 aaKnown RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ZZZ3Q8IYH5 903 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 C7orf57Q8NEG2 295 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 OR7G2Q8NG99 324 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 ZNF675Q8TD23 568 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 NCLNQ969V3 563 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 PPWD1Q96BP3 646 aaKnown RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 LIN37Q96GY3 246 aaPredicted RBP20.85■□□□□ 0.93
ATG4D-209ENST00000588857 NSMCE2Q96MF7 247 aa20.85■□□□□ 0.93
ATG4D-209ENST00000588857 AQP12BA6NM10 295 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 FKBP6O75344 327 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 TNFRSF21O75509 655 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 PSMG1O95456 288 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 NUDT7P0C024 238 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 AGXTP21549 392 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 MAGEA8P43361 318 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 CLDN6P56747 220 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 RAB15P59190 212 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 DSTNP60981 165 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 PRICKLE4Q2TBC4 344 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 VWA2Q5GFL6 755 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 DCAF12Q5T6F0 453 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 TNFAIP8L2Q6P589 184 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-209ENST00000588857 QSOX2Q6ZRP7 698 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 PTOV1Q86YD1 416 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 AQP12AQ8IXF9 295 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 C11orf65Q8NCR3 313 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 PELOQ9BRX2 385 aaKnown RBP20.84■□□□□ 0.93
ATG4D-209ENST00000588857 NECTIN3Q9NQS3 549 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 SLC22A11Q9NSA0 550 aa20.84■□□□□ 0.93
ATG4D-209ENST00000588857 TGFBR3LH3BV60 316 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 UPK1AO00322 258 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 KRT36O76013 467 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 HMGN2P05204 90 aaKnown RBP20.83■□□□□ 0.92
ATG4D-209ENST00000588857 IFI6P09912 130 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 MATN1P21941 496 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 STT3AP46977 705 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 MAPK10P53779 464 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 POLE2P56282 527 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 RBBP4Q09028 425 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 AAGABQ6PD74 315 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 FAM111BQ6SJ93 734 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 COX15Q7KZN9 410 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 OR2L13Q8N349 312 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 RIT1Q92963 219 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 FAM162AQ96A26 154 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 ULBP3Q9BZM4 244 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 TGIF2Q9GZN2 237 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 DCLRE1BQ9H816 532 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 GORASP2Q9H8Y8 452 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 ANKRA2Q9H9E1 313 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 THUMPD1Q9NXG2 353 aaKnown RBP20.83■□□□□ 0.92
ATG4D-209ENST00000588857 MAT2BQ9NZL9 334 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 NTMQ9P121 344 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 CTSFQ9UBX1 484 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 CCDC88CQ9P219 2028 aa20.83■□□□□ 0.92
ATG4D-209ENST00000588857 A0A087WV62 115 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 MEN1O00255 615 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 PLOD3O60568 738 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 ONECUT2O95948 504 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 IFNA16P05015 189 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 KLK3P07288 261 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 JMJD7P0C870 316 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 BMP2P12643 396 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 ITIH1P19827 911 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 RORAP35398 523 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 KHKP50053 298 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 MRPS22P82650 360 aaKnown RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 RHDQ02161 417 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 VEZF1Q14119 521 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 LASP1Q14847 261 aaKnown RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 TRMT12Q53H54 448 aaKnown RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 HES3Q5TGS1 186 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 SLCO6A1Q86UG4 719 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 GALNT12Q8IXK2 581 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 PRSS58Q8IYP2 241 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 HORMAD2Q8N7B1 307 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 PYDC1Q8WXC3 89 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 MAL2Q969L2 176 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 MS4A4EQ96PG1 132 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 TMEM38AQ9H6F2 299 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 EQTNQ9NQ60 294 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 IFT80Q9P2H3 777 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 MKL2Q9ULH7 1088 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 C19orf53Q9UNZ5 99 aaPredicted RBP20.82■□□□□ 0.92
ATG4D-209ENST00000588857 CLDN16Q9Y5I7 305 aa20.82■□□□□ 0.92
ATG4D-209ENST00000588857 H0Y3Z8 333 aa20.81■□□□□ 0.92
ATG4D-209ENST00000588857 CREG1O75629 220 aa20.81■□□□□ 0.92
ATG4D-209ENST00000588857 C8BP07358 591 aa20.81■□□□□ 0.92
ATG4D-209ENST00000588857 PCGF2P35227 344 aa20.81■□□□□ 0.92
ATG4D-209ENST00000588857 AP2B1P63010 937 aa20.81■□□□□ 0.92
ATG4D-209ENST00000588857 TXNL4AP83876 142 aaKnown RBP20.81■□□□□ 0.92
ATG4D-209ENST00000588857 MAP4K2Q12851 820 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms