RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 A8MUI8 341 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 MKRN2OSH3BPM6 223 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 SLC22A3O75751 556 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 CBX7O95931 251 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 NCF2P19878 526 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 GPX3P22352 226 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 MC3RP41968 323 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 KIR3DL1P43629 444 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 ZFP36L2P47974 494 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 MRPL19P49406 292 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 CDK9P50750 372 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 MANFP55145 182 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 WNT3P56703 355 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 SRSF11Q05519 484 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 DUSP8Q13202 625 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 DPY19L1Q2PZI1 675 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 H3F3CQ6NXT2 135 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 TMEM107Q6UX40 140 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 HSDL2Q6YN16 418 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 RNF111Q6ZNA4 994 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 C9orf40Q8IXQ3 194 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 ZNF615Q8N8J6 731 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 OR7G2Q8NG99 324 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 OR8J2Q8NGG1 315 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 THAP3Q8WTV1 239 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 ZBTB18Q99592 522 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 NPAS2Q99743 824 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 DEFB126Q9BYW3 111 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 NSRP1Q9H0G5 558 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 OR10A5Q9H207 317 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 RABEP2Q9H5N1 569 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 ZNF385DQ9H6B1 395 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 IGSF10Q6WRI0 2623 aa17.63■□□□□ 0.41
CLPTM1-209ENST00000588855 A0A1W2PRB8 838 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ERVH48-1M5A8F1 160 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 MAN1A2O60476 641 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 GPC1P35052 558 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 SOX11P35716 441 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ATP4BP51164 291 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 DGKQP52824 942 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 RNF4P78317 190 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 PHC1P78364 1004 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 KCNAB2Q13303 367 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 SQLEQ14534 574 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 FHL5Q5TD97 284 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 AGAP7PQ5VUJ5 663 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 SPATA21Q7Z572 469 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 NATD1Q8N6N6 113 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ABHD17AQ96GS6 310 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 AGAP4Q96P64 663 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ELAC2Q9BQ52 826 aaKnown RBP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 LIN28AQ9H9Z2 209 aaKnown RBP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 BCAP29Q9UHQ4 241 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 TRIM33Q9UPN9 1127 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 PCDHGA9Q9Y5G4 932 aaKnown RBP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 K7EM74 188 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ZFAND5O76080 213 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 C6orf47O95873 294 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 S100A3P33764 101 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 MLC1Q15049 377 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 CRB2Q5IJ48 1285 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 PCSK4Q6UW60 755 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 CPLX4Q7Z7G2 160 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 CLECL1Q8IZS7 167 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 SLC5A8Q8N695 610 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 EXD3Q8N9H8 876 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 GLB1L3Q8NCI6 653 aaPredicted RBP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 OR7G1Q8NGA0 311 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 OR52R1Q8NGF1 315 aa17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ZBTB20Q9HC78 741 aaPredicted RBP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.62■□□□□ 0.41
CLPTM1-209ENST00000588855 ZFYVE26Q68DK2 2539 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 TMEM200CA6NKL6 621 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 PLOD2O00469 737 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 PLOD3O60568 738 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 SCN2BO60939 215 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 SLITRK5O94991 958 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 PDGFAP04085 211 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 EBPQ15125 230 aaKnown RBP17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 METTL21CQ5VZV1 264 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 TCTN3Q6NUS6 607 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 C16orf47Q6ZP98 133 aaPredicted RBP17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 LINC00696Q6ZRV3 163 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 ANKRD46Q86W74 232 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 OR8K3Q8NH51 312 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 C16orf52Q8NHV5 167 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 OR5P2Q8WZ92 322 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 ERP27Q96DN0 273 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 ELP4Q96EB1 424 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 MAGED4Q96JG8 741 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 GAL3ST4Q96RP7 486 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 SMAD5Q99717 465 aaKnown RBP17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 ADNPQ9H2P0 1102 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 CDCP1Q9H5V8 836 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 SIRT3Q9NTG7 399 aaPredicted RBP17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 DDX18Q9NVP1 670 aaKnown RBP17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 TP53TG5Q9Y2B4 290 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 DTX4Q9Y2E6 619 aa17.61■□□□□ 0.41
CLPTM1-209ENST00000588855 ATRXP46100 2492 aa17.6■□□□□ 0.41
CLPTM1-209ENST00000588855 A0A087WV62 115 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms