RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 DHFR2Q86XF0 187 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 CLEC4FQ8N1N0 589 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 TMEM102Q8N9M5 508 aaPredicted RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 OR10A6Q8NH74 314 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 DNAJB8Q8NHS0 232 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 FAM110BQ8TC76 370 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 PNPT1Q8TCS8 783 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 ADAMTS17Q8TE56 1095 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 EXOSC8Q96B26 276 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 NACC2Q96BF6 587 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 LRGUKQ96M69 825 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 GBP5Q96PP8 586 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 KCNC2Q96PR1 638 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 PRPF18Q99633 342 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 TBCDQ9BTW9 1192 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 THUMPD3Q9BV44 507 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 TRIM15Q9C019 465 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 ATAD3AQ9NVI7 634 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 NDOR1Q9UHB4 597 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 BCAP29Q9UHQ4 241 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 FBXW2Q9UKT8 454 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 PADI2Q9Y2J8 665 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 MRPS2Q9Y399 296 aaKnown RBP9.65□□□□□ -0.86
APOC1-203ENST00000588802 ZNF451Q9Y4E5 1061 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 KLK4Q9Y5K2 254 aa9.65□□□□□ -0.86
APOC1-203ENST00000588802 PRSS51A0A1B0GVH4 220 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 TCRBV3S1A0A5B6 114 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 C1orf226A1L170 272 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZNF860A6NHJ4 632 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 RNASET2O00584 256 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 AIFM1O95831 613 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 FAM58BPP0C7Q3 252 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 GP1BBP13224 206 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 DDCP20711 480 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 HIST1H1TP22492 207 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 ALAS2P22557 587 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 HTR1EP28566 365 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 VSX2P58304 361 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 TRA2BP62995 288 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 TGM3Q08188 693 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 SPATS1Q496A3 300 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 NDUFAF5Q5TEU4 345 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZNF385CQ66K41 422 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 MRM1Q6IN84 353 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 RNF111Q6ZNA4 994 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 LRRC74BQ6ZQY2 392 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZNF621Q6ZSS3 439 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZNF551Q7Z340 670 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 RAB43Q86YS6 212 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 SPPL2CQ8IUH8 684 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZCCHC7Q8N3Z6 543 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 DTWD1Q8N5C7 304 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 METTL27Q8N6F8 245 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 CSNK1A1LQ8N752 337 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ACOT4Q8N9L9 421 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 FAM47BQ8NA70 645 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 CAMKVQ8NCB2 501 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 GALNT11Q8NCW6 608 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 UTP15Q8TED0 518 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 RERGQ96A58 199 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZUFSPQ96AP4 578 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 TM4SF19Q96DZ7 209 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 MTERF3Q96E29 417 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 FAM120BQ96EK7 910 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 TCTN2Q96GX1 697 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ZNF583Q96ND8 569 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 MAPKAP1Q9BPZ7 522 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 ECSITQ9BQ95 431 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 MUC13Q9H3R2 512 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 SLAMF7Q9NQ25 335 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 PRDM7Q9NQW5 492 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 IFT80Q9P2H3 777 aaPredicted RBP9.64□□□□□ -0.87
APOC1-203ENST00000588802 ERVK-11Q9UQG0 969 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 V9GYQ6 96 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 SCN2AQ99250 2005 aa9.64□□□□□ -0.87
APOC1-203ENST00000588802 UBR5O95071 2799 aaPredicted RBP9.63□□□□□ -0.87
APOC1-203ENST00000588802 ZSCAN9O15535 394 aaPredicted RBP9.63□□□□□ -0.87
APOC1-203ENST00000588802 DPM1O60762 260 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 TBX19O60806 448 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 CNOT3O75175 753 aaKnown RBP9.63□□□□□ -0.87
APOC1-203ENST00000588802 ALOX12BO75342 701 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 AGFG2O95081 481 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 SCELO95171 688 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 GGT1P19440 569 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 FOLR3P41439 243 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 GSTM5P46439 218 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 GABRA4P48169 554 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 PTDSS1P48651 473 aaKnown RBP9.63□□□□□ -0.87
APOC1-203ENST00000588802 GZMMP51124 257 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 HBA1P69905 142 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 OLR1P78380 273 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 DCDP81605 110 aaKnown RBP9.63□□□□□ -0.87
APOC1-203ENST00000588802 SLAMF1Q13291 335 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 HEPACAMQ14CZ8 416 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 C18orf63Q68DL7 685 aa9.63□□□□□ -0.87
APOC1-203ENST00000588802 JMJD6Q6NYC1 403 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms