RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-213ENST00000587604 MYLK4Q86YV6 388 aaPredicted RBP12.86□□□□□ -0.35
DNMT1-213ENST00000587604 CTAGE3PQ8IX95 158 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 REPS1Q96D71 796 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 ACTR8Q9H981 624 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 CALHM2Q9HA72 323 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 CAMK2AQ9UQM7 478 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 C15orf41Q9Y2V0 281 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 SLC6A5Q9Y345 797 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 ANGPTL3Q9Y5C1 460 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 MED12LQ86YW9 2145 aa12.86□□□□□ -0.35
DNMT1-213ENST00000587604 MBD3L4A6NDZ8 208 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 MBD3L3A6NE82 208 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 MBD3L5A6NJ08 208 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 SYCE1LA8MT33 242 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 UGDHO60701 494 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 GOSR1O95249 250 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 ATE1O95260 518 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 AIFM1O95831 613 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 IL18BPO95998 194 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 DRD2P14416 443 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 BMP7P18075 431 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 NRG3P56975 720 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 FUT7Q11130 342 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 CALCOCO2Q13137 446 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 CMC1Q7Z7K0 106 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 ZNF615Q8N8J6 731 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 C17orf47Q8NEP4 570 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 MBD3L2Q8NHZ7 208 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 RHEBL1Q8TAI7 183 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 LINC01560Q8TB33 94 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 UCN3Q969E3 161 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 ABTB1Q969K4 478 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 ADIPOR1Q96A54 375 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 WDYHV1Q96HA8 205 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 TRIB1Q96RU8 372 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 UGT2B28Q9BY64 529 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 PLEKHF2Q9H8W4 249 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 TEX10Q9NXF1 929 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-213ENST00000587604 JKAMPQ9P055 326 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 WHRNQ9P202 907 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 FETUBQ9UGM5 382 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
DNMT1-213ENST00000587604 CCDC189A1A4V9 331 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 FOXE1O00358 373 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-213ENST00000587604 PGRMC2O15173 223 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 CDH16O75309 829 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 PIK3R1P27986 724 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 AGFG1P52594 562 aaKnown RBP12.84□□□□□ -0.35
DNMT1-213ENST00000587604 GPX6P59796 221 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 SLMAPQ14BN4 828 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 SETDB1Q15047 1291 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 TOMM20Q15388 145 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 CPSF6Q16630 551 aaKnown RBP eCLIP12.84□□□□□ -0.35
DNMT1-213ENST00000587604 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 EIPR1Q53HC9 387 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 TIGD3Q6B0B8 471 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 OR52E8Q6IFG1 317 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 BIVMQ86UB2 503 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 NUDT13Q86X67 352 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 GALNT12Q8IXK2 581 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 PPM1NQ8N819 430 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 WFDC11Q8NEX6 87 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 ZPLD1Q8TCW7 415 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 NXNL1Q96CM4 212 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 OR10A5Q9H207 317 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 RNF14Q9UBS8 474 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 ACOT9Q9Y305 439 aa12.84□□□□□ -0.35
DNMT1-213ENST00000587604 A0A1W2PS29 197 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 EEF1E1-BLOC1S5C9J1V9 151 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 EEF1E1O43324 174 aaKnown RBP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 ACTL6AO96019 429 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 ABCB1P08183 1280 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 CT62P0C5K7 136 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 NAGAP17050 411 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 ABCD3P28288 659 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 PTPN6P29350 595 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 HOXC12P31275 282 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 NEK2P51955 445 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 NAGLUP54802 743 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 ALDH18A1P54886 795 aaKnown RBP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 GNG11P61952 73 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 MRPS25P82663 173 aaKnown RBP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 RCAN2Q14206 197 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 PCBP2Q15366 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 PFKFB4Q16877 469 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-213ENST00000587604 DCST1Q5T197 706 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 CCDC91Q7Z6B0 441 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 L3MBTL4Q8NA19 623 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 OR7G1Q8NGA0 311 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 OR4K14Q8NGD5 310 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 OR1J4Q8NGS1 313 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 WDR20Q8TBZ3 569 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 DACH2Q96NX9 599 aa12.83□□□□□ -0.36
DNMT1-213ENST00000587604 NAPGQ99747 312 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms