RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LRRC25Q8N386 305 aaPredicted RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 ESX1Q8N693 406 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 OR52N2Q8NGI0 321 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 DNAJB14Q8TBM8 379 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 FGF11Q92914 225 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 MR1Q95460 341 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 GFM2Q969S9 779 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 BBS4Q96RK4 519 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 RPF2Q9H7B2 306 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 YY1AP1Q9H869 796 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 GORASP2Q9H8Y8 452 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 TPT1P8Q9HAU6 139 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 RNPEPL1Q9HAU8 725 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 IL1RL2Q9HB29 575 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 C3orf14Q9HBI5 128 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 ZNF304Q9HCX3 659 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 TEX10Q9NXF1 929 aaPredicted RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 KCMF1Q9P0J7 381 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 NDOR1Q9UHB4 597 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 ATG4BQ9Y4P1 393 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 PCDHB14Q9Y5E9 798 aa11.86□□□□□ -0.51
VMP1-202ENST00000585847 FLNBO75369 2602 aaKnown RBP11.86□□□□□ -0.51
VMP1-202ENST00000585847 A0A1W2PR48 441 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ELOVL7A1L3X0 281 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 TMEM247A6NEH6 219 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 VSTM2BA6NLU5 285 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 EFSO43281 561 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ASNA1O43681 348 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 PDE5AO76074 875 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 GBAP04062 536 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ATP1B1P05026 303 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 FHP07954 510 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 FCGR1AP12314 374 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 GALNSP34059 522 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 HSD17B7P56937 341 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 RHDQ02161 417 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 DSG2Q14126 1118 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 SERTAD2Q14140 314 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 KPNB1Q14974 876 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 CYP51A1Q16850 503 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ZNF630Q2M218 657 aaPredicted RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 FAM69BQ5VUD6 431 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 CPZQ66K79 652 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ZNF621Q6ZSS3 439 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 OVCH1Q7RTY7 1134 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 GPR155Q7Z3F1 870 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ZNF605Q86T29 641 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 MSRB3Q8IXL7 192 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 CA13Q8N1Q1 262 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 LSM14AQ8ND56 463 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 OR4K14Q8NGD5 310 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ZFP90Q8TF47 636 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 FKBP10Q96AY3 582 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 NEURL3Q96EH8 262 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 MMABQ96EY8 250 aaPredicted RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 AMDHD1Q96NU7 426 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 SLC7A5P2Q9GIP4 190 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 VCX3BQ9H321 246 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 PRORYQ9H606 182 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 TMEM38AQ9H6F2 299 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 SLC25A37Q9NYZ2 338 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 PTGFRNQ9P2B2 879 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 STX18Q9P2W9 335 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 STOML1Q9UBI4 398 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 CTSFQ9UBX1 484 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 CES1P1Q9UKY3 287 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 PADI1Q9ULC6 663 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 MMACHCQ9Y4U1 282 aa11.85□□□□□ -0.51
VMP1-202ENST00000585847 ASH1LQ9NR48 2969 aaKnown RBP11.85□□□□□ -0.51
VMP1-202ENST00000585847 A0A087WV62 115 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 RNF103-CHMP3A0A140T963 221 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 TTC36A6NLP5 189 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 PLOD2O00469 737 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 CHST10O43529 356 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 JRKO75564 520 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 KLF7O75840 302 aaPredicted RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 ATP6V1G2O95670 118 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 GPR75O95800 540 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 C6orf47O95873 294 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 IFNA14P01570 189 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 KLK3P07288 261 aaPredicted RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 CHI3L1P36222 383 aaPredicted RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 MTPNP58546 118 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 HBA1P69905 142 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 PSPHP78330 225 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 DNASE1L3Q13609 305 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 ERV3-1Q14264 604 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 NKG7Q16617 165 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 SPDYE7PQ495Y7 208 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 VWA2Q5GFL6 755 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 RABL3Q5HYI8 236 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 PRAMEF8Q5VWM4 474 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 PRAMEF7Q5VXH5 474 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 ZCCHC12Q6PEW1 402 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 ANKRD46Q86W74 232 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 ZC3H7AQ8IWR0 971 aaKnown RBP11.84□□□□□ -0.51
VMP1-202ENST00000585847 MICU2Q8IYU8 434 aa11.84□□□□□ -0.51
VMP1-202ENST00000585847 C11orf65Q8NCR3 313 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms