RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 PRSS58Q8IYP2 241 aa15.08■□□□□ 0
SS18-226ENST00000585241 ADCY4Q8NFM4 1077 aa15.08■□□□□ 0
SS18-226ENST00000585241 OR52N2Q8NGI0 321 aa15.08■□□□□ 0
SS18-226ENST00000585241 UTP4Q969X6 686 aaKnown RBP15.08■□□□□ 0
SS18-226ENST00000585241 PPWD1Q96BP3 646 aaKnown RBP15.08■□□□□ 0
SS18-226ENST00000585241 CDRT15Q96T59 188 aa15.08■□□□□ 0
SS18-226ENST00000585241 CRB3Q9BUF7 120 aa15.08■□□□□ 0
SS18-226ENST00000585241 RAD21L1Q9H4I0 556 aa15.08■□□□□ 0
SS18-226ENST00000585241 KAT8Q9H7Z6 458 aaKnown RBP15.08■□□□□ 0
SS18-226ENST00000585241 C3orf14Q9HBI5 128 aa15.08■□□□□ 0
SS18-226ENST00000585241 GPATCH2Q9NW75 528 aa15.08■□□□□ 0
SS18-226ENST00000585241 C3orf18Q9UK00 162 aa15.08■□□□□ 0
SS18-226ENST00000585241 C19orf53Q9UNZ5 99 aaPredicted RBP15.08■□□□□ 0
SS18-226ENST00000585241 WASF3Q9UPY6 502 aa15.08■□□□□ 0
SS18-226ENST00000585241 SNX8Q9Y5X2 465 aa15.08■□□□□ 0
SS18-226ENST00000585241 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.07■□□□□ 0
SS18-226ENST00000585241 LOC102723996A0A087X1L8 192 aa15.07■□□□□ 0
SS18-226ENST00000585241 MYOCOSA0A1B0GUC4 107 aa15.07■□□□□ 0
SS18-226ENST00000585241 A0A1W2PQ72 361 aa15.07■□□□□ 0
SS18-226ENST00000585241 CFAP73A6NFT4 308 aa15.07■□□□□ 0
SS18-226ENST00000585241 EVPLLA8MZ36 301 aa15.07■□□□□ 0
SS18-226ENST00000585241 UPK1AO00322 258 aa15.07■□□□□ 0
SS18-226ENST00000585241 CBX7O95931 251 aa15.07■□□□□ 0
SS18-226ENST00000585241 C1QCP02747 245 aa15.07■□□□□ 0
SS18-226ENST00000585241 UMODP07911 640 aa15.07■□□□□ 0
SS18-226ENST00000585241 ATXN8OSP0DMR3 200 aa15.07■□□□□ 0
SS18-226ENST00000585241 BMP2P12643 396 aa15.07■□□□□ 0
SS18-226ENST00000585241 HSD17B1P14061 328 aa15.07■□□□□ 0
SS18-226ENST00000585241 S1PR1P21453 382 aa15.07■□□□□ 0
SS18-226ENST00000585241 PTGER1P34995 402 aa15.07■□□□□ 0
SS18-226ENST00000585241 PGM1P36871 562 aa15.07■□□□□ 0
SS18-226ENST00000585241 GZMMP51124 257 aa15.07■□□□□ 0
SS18-226ENST00000585241 FOXL2P58012 376 aa15.07■□□□□ 0
SS18-226ENST00000585241 MRPS35P82673 323 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 TXNL4AP83876 142 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 PRR5P85299 388 aa15.07■□□□□ 0
SS18-226ENST00000585241 FADDQ13158 208 aa15.07■□□□□ 0
SS18-226ENST00000585241 CEACAM7Q14002 265 aa15.07■□□□□ 0
SS18-226ENST00000585241 FXNQ16595 210 aa15.07■□□□□ 0
SS18-226ENST00000585241 SAMD4BQ5PRF9 694 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 EXOSC6Q5RKV6 272 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 FAM111BQ6SJ93 734 aa15.07■□□□□ 0
SS18-226ENST00000585241 NET1Q7Z628 596 aaPredicted RBP15.07■□□□□ 0
SS18-226ENST00000585241 ANKRD37Q7Z713 158 aa15.07■□□□□ 0
SS18-226ENST00000585241 CALHM3Q86XJ0 350 aa15.07■□□□□ 0
SS18-226ENST00000585241 CLEC4FQ8N1N0 589 aa15.07■□□□□ 0
SS18-226ENST00000585241 VWA5B2Q8N398 1253 aa15.07■□□□□ 0
SS18-226ENST00000585241 ENDOVQ8N8Q3 282 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 OR5AK3PQ8NH89 298 aa15.07■□□□□ 0
SS18-226ENST00000585241 MIPOL1Q8TD10 442 aa15.07■□□□□ 0
SS18-226ENST00000585241 PTPMT1Q8WUK0 201 aaPredicted RBP15.07■□□□□ 0
SS18-226ENST00000585241 KAT2AQ92830 837 aa15.07■□□□□ 0
SS18-226ENST00000585241 RIT1Q92963 219 aa15.07■□□□□ 0
SS18-226ENST00000585241 GIMAP5Q96F15 307 aa15.07■□□□□ 0
SS18-226ENST00000585241 THTPAQ9BU02 230 aa15.07■□□□□ 0
SS18-226ENST00000585241 GPR87Q9BY21 358 aa15.07■□□□□ 0
SS18-226ENST00000585241 TRIM8Q9BZR9 551 aa15.07■□□□□ 0
SS18-226ENST00000585241 ZCCHC3Q9NUD5 404 aaKnown RBP15.07■□□□□ 0
SS18-226ENST00000585241 PADI2Q9Y2J8 665 aa15.07■□□□□ 0
SS18-226ENST00000585241 L3MBTL1Q9Y468 752 aa15.07■□□□□ 0
SS18-226ENST00000585241 CCDC88CQ9P219 2028 aa15.06■□□□□ 0
SS18-226ENST00000585241 PRORSD1PA6NEY8 169 aa15.06■□□□□ 0
SS18-226ENST00000585241 BRINP1O60477 761 aa15.06■□□□□ 0
SS18-226ENST00000585241 BCAS2O75934 225 aaPredicted RBP15.06■□□□□ 0
SS18-226ENST00000585241 IGHEP01854 428 aa15.06■□□□□ 0
SS18-226ENST00000585241 IFNA16P05015 189 aa15.06■□□□□ 0
SS18-226ENST00000585241 TCN2P20062 427 aa15.06■□□□□ 0
SS18-226ENST00000585241 CHI3L1P36222 383 aaPredicted RBP15.06■□□□□ 0
SS18-226ENST00000585241 PLA2G5P39877 138 aa15.06■□□□□ 0
SS18-226ENST00000585241 KCNJ2P63252 427 aa15.06■□□□□ 0
SS18-226ENST00000585241 DNASE1L3Q13609 305 aa15.06■□□□□ 0
SS18-226ENST00000585241 RGNQ15493 299 aa15.06■□□□□ 0
SS18-226ENST00000585241 SPDYE7PQ495Y7 208 aa15.06■□□□□ 0
SS18-226ENST00000585241 TRMT12Q53H54 448 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 SHISA6Q6ZSJ9 500 aa15.06■□□□□ 0
SS18-226ENST00000585241 LANCL3Q6ZV70 420 aa15.06■□□□□ 0
SS18-226ENST00000585241 C6orf120Q7Z4R8 191 aa15.06■□□□□ 0
SS18-226ENST00000585241 SERPINA11Q86U17 422 aa15.06■□□□□ 0
SS18-226ENST00000585241 ULK2Q8IYT8 1036 aa15.06■□□□□ 0
SS18-226ENST00000585241 C10orf111Q8N326 155 aa15.06■□□□□ 0
SS18-226ENST00000585241 NUP43Q8NFH3 380 aa15.06■□□□□ 0
SS18-226ENST00000585241 OR14A16Q8NHC5 309 aa15.06■□□□□ 0
SS18-226ENST00000585241 METTL21AQ8WXB1 218 aa15.06■□□□□ 0
SS18-226ENST00000585241 HOXB13Q92826 284 aaPredicted RBP15.06■□□□□ 0
SS18-226ENST00000585241 MCUR1Q96AQ8 359 aa15.06■□□□□ 0
SS18-226ENST00000585241 FBXL20Q96IG2 436 aa15.06■□□□□ 0
SS18-226ENST00000585241 ZNF583Q96ND8 569 aa15.06■□□□□ 0
SS18-226ENST00000585241 MS4A4EQ96PG1 132 aa15.06■□□□□ 0
SS18-226ENST00000585241 THUMPD3Q9BV44 507 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 SPATA9Q9BWV2 254 aa15.06■□□□□ 0
SS18-226ENST00000585241 THSD1Q9NS62 852 aa15.06■□□□□ 0
SS18-226ENST00000585241 DDX18Q9NVP1 670 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 ADA2Q9NZK5 511 aa15.06■□□□□ 0
SS18-226ENST00000585241 C19orf25Q9UFG5 118 aaPredicted RBP15.06■□□□□ 0
SS18-226ENST00000585241 PPIEQ9UNP9 301 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 FARSAQ9Y285 508 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 PTRH2Q9Y3E5 179 aaKnown RBP15.06■□□□□ 0
SS18-226ENST00000585241 PCDHGA6Q9Y5G7 932 aa15.06■□□□□ 0
SS18-226ENST00000585241 CFAP54Q96N23 3096 aa15.06■□□□□ 0
SS18-226ENST00000585241 FAM220BPB1ANY3 271 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms