RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 UNC5DQ6UXZ4 953 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 VN1R4Q7Z5H5 301 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DCP2Q8IU60 420 aaKnown RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 ZUFSPQ96AP4 578 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 ALPK1Q96QP1 1244 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DPYSL5Q9BPU6 564 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 LRRC61Q9BV99 259 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 SPRTNQ9H040 489 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 MRGBPQ9NV56 204 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 PSMD9O00233 223 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 FGF17O60258 216 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 WNT1P04628 370 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DBTP11182 482 aaKnown RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 PTPN6P29350 595 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 CENPAP49450 140 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 DAB2P98082 770 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 BNC1Q01954 994 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 FZD2Q14332 565 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 ZNF311Q5JNZ3 666 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 B3GNT6Q6ZMB0 384 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 THAP5Q7Z6K1 395 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 TNIP2Q8NFZ5 429 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 MSLNLQ96KJ4 702 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 PTCHD1Q96NR3 888 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 MVB12BQ9H7P6 319 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 CACYBPQ9HB71 228 aaKnown RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 LRIT1Q9P2V4 623 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 C3orf18Q9UK00 162 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 RPS6KA6Q9UK32 745 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 GPR55Q9Y2T6 319 aaPredicted RBP9.69□□□□□ -0.86
RFFL-212ENST00000584655 TMED5Q9Y3A6 229 aa9.69□□□□□ -0.86
RFFL-212ENST00000584655 HELZP42694 1942 aaKnown RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 B3GALT2O43825 422 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ATP6V1G1O75348 118 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 PCSK2P16519 638 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CD38P28907 300 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 TNFRSF4P43489 277 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ALDH3A2P51648 485 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 VBP1P61758 197 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 EIF2B5Q13144 721 aaKnown RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 CCINQ13939 588 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 GBX1Q14549 363 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 RFX4Q33E94 735 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 PERM1Q5SV97 790 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ABHD17CQ6PCB6 329 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 COMTD1Q86VU5 262 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 PLPP6Q8IY26 295 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 STX19Q8N4C7 294 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 OR6T1Q8NGN1 323 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 MAFAQ8NHW3 353 aaPredicted RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 GIPC3Q8TF64 312 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 RAB26Q9ULW5 256 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 RBMX2Q9Y388 322 aaKnown RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 C17orf113A0A1B0GUU1 675 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 RASAL1O95294 804 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 GYPBP06028 91 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 SMIM18P0DKX4 95 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 BMP2P12643 396 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 PRG2P13727 222 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 TGM3Q08188 693 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 LCTLQ6UWM7 567 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 NEK10Q6ZWH5 1172 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 UBE2J2Q8N2K1 259 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 TCEANCQ8N8B7 351 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 COX18Q8N8Q8 333 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CYB561A3Q8NBI2 242 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 OR7G2Q8NG99 324 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 DNMT3AQ9Y6K1 912 aaPredicted RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 PCDH15Q96QU1 1955 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 COL12A1Q99715 3063 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ZC3H12DA2A288 527 aaKnown RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 KRT75O95678 551 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ALPLP05186 524 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 GLULP15104 373 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ITPKBP27987 946 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 MLLT3P42568 568 aaPredicted RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 ATAD3BQ5T9A4 648 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CPZQ66K79 652 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 PTCHD4Q6ZW05 846 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ZNF765Q7L2R6 523 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CHERPQ8IWX8 916 aaKnown RBP9.68□□□□□ -0.86
RFFL-212ENST00000584655 OR4D11Q8NGI4 311 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 AMDHD1Q96NU7 426 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 NDUFAF4Q9P032 175 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CLEC4AQ9UMR7 237 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 SLC17A4Q9Y2C5 497 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 CARD8Q9Y2G2 431 aa9.68□□□□□ -0.86
RFFL-212ENST00000584655 GXYLT2A0PJZ3 443 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PRAMEF25A6NGN4 478 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 TLX2O43763 284 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 ALOX12BO75342 701 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 STSP08842 583 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 HPGDP15428 266 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 ALOX12P18054 663 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 POU3F3P20264 500 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 TLX1P31314 330 aaPredicted RBP9.67□□□□□ -0.86
RFFL-212ENST00000584655 MPIP34949 423 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 PDX1P52945 283 aa9.67□□□□□ -0.86
RFFL-212ENST00000584655 CRISP3P54108 245 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms