RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PTRH2Q9Y3E5 179 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 PYGO1Q9Y3Y4 419 aa3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 HBS1LQ9Y450 684 aaKnown RBP3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 ADAMTSL1Q8N6G6 1762 aa3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 SMCHD1A6NHR9 2005 aa3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 CNTNAP1P78357 1384 aa3.63□□□□□ -1.83
SMCHD1-208ENST00000583344 ANKRD31Q8N7Z5 1873 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CEP350Q5VT06 3117 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 A0A0G2JNG1 304 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ARHGEF37A1IGU5 675 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 RGSL1A5PLK6 1076 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 TRIM64CA6NLI5 447 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 EIF4E1BA6NMX2 242 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 A8MZ25 164 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 HACD1B0YJ81 288 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 RTCAO00442 366 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CYB561D2O14569 222 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 PLIN3O60664 434 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 GLRA3O75311 464 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 TOM1L1O75674 476 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF189O75820 626 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SERPINE1P05121 402 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SUPT20HL2P0C7V6 817 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SMIM18P0DKX4 95 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CEACAM1P13688 526 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 DPEP1P16444 411 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 UBA1P22314 1058 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 MAGEA12P43365 314 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 PSMD8P48556 350 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 HSPA13P48723 471 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 MYL6P60660 151 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ABCE1P61221 599 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 YWHAGP61981 247 aaKnown RBP eCLIP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 KDSRQ06136 332 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 NIPAL4Q0D2K0 466 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CSTF3Q12996 717 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 BAATQ14032 418 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 KIR2DS5Q14953 304 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 KIAA1644Q3SXP7 199 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CCDC153Q494R4 210 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 PTPN20Q4JDL3 420 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 FASTKD1Q53R41 847 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF805Q5CZA5 627 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CXorf66Q5JRM2 361 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 GRTP1Q5TC63 336 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ARHGEF16Q5VV41 709 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SPINK14Q6IE38 97 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ZFP1Q6P2D0 407 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 KLC3Q6P597 504 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 LRRC8BQ6P9F7 803 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 EPGNQ6UW88 154 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CYP4V2Q6ZWL3 525 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 Q75L30 129 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 BTN2A1Q7KYR7 527 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CATSPER4Q7RTX7 472 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 PLPPR4Q7Z2D5 763 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SPATA24Q86W54 205 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CROCCP3Q8IVE0 287 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ZNF440Q8IYI8 595 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 HACE1Q8IYU2 909 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 LRRC43Q8N309 656 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ICA1LQ8NDH6 482 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 MOSPD2Q8NHP6 518 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SETD6Q8TBK2 473 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ADAMTS16Q8TE57 1224 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 UTP15Q8TED0 518 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 TFB1MQ8WVM0 346 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 PGAM5Q96HS1 289 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CNDP1Q96KN2 507 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 RILPQ96NA2 401 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SORT1Q99523 831 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SERPINI1Q99574 410 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 VGLL1Q99990 258 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 EBF4Q9BQW3 602 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 KIFC3Q9BVG8 833 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 MRPS26Q9BYN8 205 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SLC2A11Q9BYW1 496 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 POLR3FQ9H1D9 316 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 Q9H521 79 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 C10orf88Q9H8K7 445 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 COPS7BQ9H9Q2 264 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 TRPV4Q9HBA0 871 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ZBTB20Q9HC78 741 aaPredicted RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 RAVER2Q9HCJ3 691 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ASAH2Q9NR71 780 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CHCHD3Q9NX63 227 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 COQ3Q9NZJ6 369 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 THEGQ9P2T0 379 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 STK39Q9UEW8 545 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 CYTH4Q9UIA0 394 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 ADAM28Q9UKQ2 775 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 INTS6Q9UL03 887 aaKnown RBP3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 EMCNQ9ULC0 261 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 POMT1Q9Y6A1 747 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 SIP14410 1827 aa3.62□□□□□ -1.83
SMCHD1-208ENST00000583344 IGKV6-21A0A0C4DH24 114 aa3.61□□□□□ -1.83
SMCHD1-208ENST00000583344 PRSS51A0A1B0GVH4 220 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms