RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 ELK1P19419 428 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 GDF1P27539 372 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 PPP2R1BP30154 601 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 SLC25A1P53007 311 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 ERVPABLB-1P60509 514 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 PAX2Q02962 417 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 KHDRBS2Q5VWX1 349 aaKnown RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 PCGF5Q86SE9 256 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 UBQLNLQ8IYU4 475 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 KIAA0895Q8NCT3 520 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 U2AF1L4Q8WU68 220 aaKnown RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 CKAP2Q8WWK9 683 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 TCP11Q8WWU5 503 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 PRAM1Q96QH2 718 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 INTS14Q96SY0 518 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 C17orf62Q9BQA9 187 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 ATG101Q9BSB4 218 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 LSG1Q9H089 658 aaKnown RBP2.75□□□□□ -1.97
COPS3-217ENST00000583160 PLSCR3Q9NRY6 295 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 ABCC13Q9NSE7 274 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 PLEKHA6Q9Y2H5 1048 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 CAMTA1Q9Y6Y1 1673 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 WNK3Q9BYP7 1800 aa2.75□□□□□ -1.97
COPS3-217ENST00000583160 GPRASP1Q5JY77 1395 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 NRKQ7Z2Y5 1582 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 AKAP12Q02952 1782 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 NUP188Q5SRE5 1749 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 ARHGEF37A1IGU5 675 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 GTPBP10A4D1E9 387 aaKnown RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 CCT8L1PA6NM43 557 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 RNF212BA8MTL3 300 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 KBTBD13C9JR72 458 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 CCSO14618 274 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 PLOD3O60568 738 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 EIF5BO60841 1220 aaKnown RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 CSO75390 466 aaKnown RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 LYPD3O95274 346 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 P0C879 139 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 TSPY3P0CV98 308 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 TSPY8P0CW00 308 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 PGAM2P15259 253 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 RPL27P61353 136 aaKnown RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 PSMD6Q15008 389 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 TWISTNBQ3B726 338 aaPredicted RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 ANKRD55Q3KP44 614 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 C14orf28Q4W4Y0 310 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 AGAP6Q5VW22 663 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 OR1K1Q8NGR3 316 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 ZNF285Q96NJ3 590 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 CCT8L2Q96SF2 557 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 IDI2Q9BXS1 227 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 DPEP3Q9H4B8 488 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 ELL3Q9HB65 397 aaPredicted RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 NTNG1Q9Y2I2 539 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 TRPM1Q7Z4N2 1603 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 CPSF1Q10570 1443 aaKnown RBP2.74□□□□□ -1.97
COPS3-217ENST00000583160 CASZ1Q86V15 1759 aa2.74□□□□□ -1.97
COPS3-217ENST00000583160 QSER1Q2KHR3 1735 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 WI2-2373I1.2A0A1W2PRP0 233 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 LETM1O95202 739 aaPredicted RBP2.73□□□□□ -1.97
COPS3-217ENST00000583160 RLN1P04808 185 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 P4HA1P13674 534 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 CD1EP15812 388 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 RIPK4P57078 832 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 CXCL6P80162 114 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 LCP2Q13094 533 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 EMC2Q15006 297 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 KIAA0040Q15053 153 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 PPP1R3AQ16821 1122 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 ISXQ2M1V0 245 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 LCE1CQ5T751 118 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 LCE1BQ5T7P3 118 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 DEFB132Q7Z7B7 95 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 ZNF444Q8N0Y2 327 aaPredicted RBP2.73□□□□□ -1.97
COPS3-217ENST00000583160 GVQW1Q8N7I0 195 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 SETD6Q8TBK2 473 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 DNASE1L2Q92874 299 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 C16orf58Q96GQ5 468 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 SDHCQ99643 169 aaPredicted RBP2.73□□□□□ -1.97
COPS3-217ENST00000583160 MRPL17Q9NRX2 175 aaKnown RBP2.73□□□□□ -1.97
COPS3-217ENST00000583160 GPR173Q9NS66 373 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 FAM212BQ9NTI7 297 aaPredicted RBP2.73□□□□□ -1.97
COPS3-217ENST00000583160 SENP1Q9P0U3 644 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 MOKQ9UQ07 419 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 CHD4Q14839 1912 aa2.73□□□□□ -1.97
COPS3-217ENST00000583160 ACEP12821 1306 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 LRRC37A3O60309 1634 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 CTDSPLO15194 276 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 FIBPO43427 364 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 KIAA0513O60268 411 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 CSDE1O75534 798 aaKnown RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 SIX3O95343 332 aaPredicted RBP2.72□□□□□ -1.97
COPS3-217ENST00000583160 USP6P35125 1406 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 MAGEA9P43362 315 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 IER3P46695 156 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 CRB1P82279 1406 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 NUCB1Q02818 461 aa2.72□□□□□ -1.97
COPS3-217ENST00000583160 ODF2Q5BJF6 829 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms