RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RTL4Q6ZR62 310 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 TICAM1Q8IUC6 712 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 CCDC116Q8IYX3 515 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 CPSF7Q8N684 471 aaKnown RBP11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 PSD4Q8NDX1 1056 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 OR7G1Q8NGA0 311 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 OR6Y1Q8NGX8 325 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 MGARPQ8TDB4 240 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF681Q96N22 645 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 FRMD6Q96NE9 622 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 BBS4Q96RK4 519 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 TMBIM4Q9HC24 238 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 MAT2BQ9NZL9 334 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 EHD3Q9NZN3 535 aa11.66□□□□□ -0.54
SMARCE1-218ENST00000582955 TMEM120BA0PK00 339 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 ASPDHA6ND91 283 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 TMEM114B3SHH9 223 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 NPIPB8E9PQR5 432 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 KLRC4-KLRK1H3BQV0 150 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 LSM1O15116 133 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 PEX1O43933 1283 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 DHRS4L1P0CG22 281 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 BGNP21810 368 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 TACR1P25103 407 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 MST1P26927 711 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 NR0B1P51843 470 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 TDGF1P3P51864 188 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 ABCE1P61221 599 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 MAGOHP61326 146 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 MRPS35P82673 323 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 MAP4K2Q12851 820 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 EXOSC7Q15024 291 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 RFTN2Q52LD8 501 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 CES4AQ5XG92 561 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 IKBIPQ70UQ0 350 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 SULF2Q8IWU5 870 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 TAGAPQ8N103 731 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 FAM26EQ8N5C1 309 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF615Q8N8J6 731 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 OR9A2Q8NGT5 310 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 GFM2Q969S9 779 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 EGLN2Q96KS0 407 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 PPP3R2Q96LZ3 170 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 CCT7Q99832 543 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 TSPAN10Q9H1Z9 355 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 ZNF395Q9H8N7 513 aaPredicted RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 SEC14L3Q9UDX4 400 aa11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 WBP11Q9Y2W2 641 aaKnown RBP11.65□□□□□ -0.54
SMARCE1-218ENST00000582955 ESPL1Q14674 2120 aa11.65□□□□□ -0.55
SMARCE1-218ENST00000582955 ATP6AP2A0A1C7CYW4 349 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NPIPA5E9PKD4 350 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 G3V3Y1 287 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 AKAP10O43572 662 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 PEX11AO75192 247 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ATP6AP2O75787 350 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 AGFG2O95081 481 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 UNC5CO95185 931 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 LRATO95237 230 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NADKO95544 446 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 P04436 131 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 PCSK2P16519 638 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF24P17028 368 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 SDC1P18827 310 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 S1PR1P21453 382 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 GRK2P25098 689 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NTSP30990 170 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 MPIP34949 423 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 RFC3P40938 356 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC1A6P48664 564 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 KCNK10P57789 538 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 MGAT2Q10469 447 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 STX3Q13277 289 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 UBAP2LQ14157 1087 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ATP6AP1LQ52LC2 224 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 TRMT12Q53H54 448 aaKnown RBP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF628Q5EBL2 1059 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 FAM9CQ8IZT9 166 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 SLC15A4Q8N697 577 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF781Q8N8C0 355 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 GOLM1Q8NBJ4 401 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 POGLUT1Q8NBL1 392 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 FAM13CQ8NE31 585 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 OR52R1Q8NGF1 315 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 CLHC1Q8NHS4 586 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 C16orf52Q8NHV5 167 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 KAT2AQ92830 837 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 SPACA9Q96E40 222 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 FCRL1Q96LA6 429 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 SGCZQ96LD1 299 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 TSSK3Q96PN8 268 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ARGLU1Q9NWB6 273 aaPredicted RBP11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NKIRAS1Q9NYS0 192 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 GIMAP2Q9UG22 337 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 ZNF639Q9UID6 485 aa11.64□□□□□ -0.55
SMARCE1-218ENST00000582955 NPIPA1Q9UND3 350 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms