RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 PCDHGB3Q9Y5G1 929 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 ACACBO00763 2458 aa8.75□□□□□ -1.01
SS18-220ENST00000582092 BLACEA4D250 179 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ZNF860A6NHJ4 632 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CLDN4O14493 209 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 P2RX6O15547 441 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 OR10H2O60403 315 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 PRKRAO75569 313 aaKnown RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 ZBTB11O95625 1053 aaPredicted RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 HPRP00739 348 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SMIM10L1P0DMW3 83 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 OR12D1P0DN82 309 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 THRBP10828 461 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 RNH1P13489 461 aaKnown RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 NT5EP21589 574 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 DNAJA1P31689 397 aaKnown RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 IFNA8P32881 189 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CAPGP40121 348 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CRISP3P54108 245 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ARSFP54793 590 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 RAB38P57729 211 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 RUNX2Q13950 521 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SHBQ15464 509 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ST3GAL2Q16842 350 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 FAM214AQ32MH5 1076 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 AMZ1Q400G9 498 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CRB2Q5IJ48 1285 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 C6orf132Q5T0Z8 1188 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 TTC33Q6PID6 262 aaPredicted RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 TMEM107Q6UX40 140 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CCDC80Q76M96 950 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 TMPRSS7Q7RTY8 843 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 C16orf62Q7Z3J2 963 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SLCO6A1Q86UG4 719 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 GPR135Q8IZ08 494 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 TAGAPQ8N103 731 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 C10orf111Q8N326 155 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 HORMAD2Q8N7B1 307 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 FAM86B1Q8N7N1 296 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ARL10Q8N8L6 244 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 Q8N9G6 341 aaPredicted RBP8.74□□□□□ -1.01
SS18-220ENST00000582092 OR6C4Q8NGE1 309 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 OR4C6Q8NH72 309 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ADAMTS15Q8TE58 950 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 RAB8BQ92930 207 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SMIM10Q96HG1 83 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 RDH12Q96NR8 316 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ADI1Q9BV57 179 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 YIPF2Q9BWQ6 316 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 AICDAQ9GZX7 198 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ING2Q9H160 280 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 CHST8Q9H2A9 424 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 EPS8L2Q9H6S3 715 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 ZNF556Q9HAH1 456 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 FANCEQ9HB96 536 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 PNPLA3Q9NST1 481 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 STARD5Q9NSY2 213 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 SEC14L3Q9UDX4 400 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 KLHL3Q9UH77 587 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 C3orf18Q9UK00 162 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 LIPT1Q9Y234 373 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 U3KQV3 271 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 LRP4O75096 1905 aa8.74□□□□□ -1.01
SS18-220ENST00000582092 NUP214P35658 2090 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 ARHGEF17Q96PE2 2063 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 HYKKA2RU49 373 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 C7orf72A4D263 438 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 H0YAE9 185 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SGK494L7N484 410 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 TNFRSF11BO00300 401 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SIGLEC6O43699 453 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 NUDT21O43809 227 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 GALR3O60755 368 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 PRAMEF10O60809 474 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 UGT2B11O75310 529 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SEC24DO94855 1032 aaPredicted RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 SLITRK5O94991 958 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 OPN1SWP03999 348 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 IFNW1P05000 195 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GLB1P16278 677 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SPINK2P20155 84 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 FPR1P21462 350 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 ACP1P24666 158 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 RRM2P31350 389 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 MC3RP41968 323 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GPR3P46089 330 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 LSSP48449 732 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 MAPK10P53779 464 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 OR1D5P58170 312 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SMIM11AP58511 58 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 PPP1CAP62136 330 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 RPS26P62854 115 aaKnown RBP8.73□□□□□ -1.01
SS18-220ENST00000582092 OLR1P78380 273 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GPLD1P80108 840 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 STX4Q12846 297 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 SLC13A2Q13183 592 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 GRM7Q14831 915 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 C16orf72Q14CZ0 275 aa8.73□□□□□ -1.01
SS18-220ENST00000582092 DEFB110Q30KQ9 67 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms