RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 ZNF131P52739 623 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 NDST1P52848 882 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 GALK2Q01415 458 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 NPRL3Q12980 569 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 NKAIN2Q5VXU1 208 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 HIST2H2AA3Q6FI13 130 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 LUZP1Q86V48 1076 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF410Q86VK4 478 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF671Q8TAW3 534 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 KRT35Q92764 455 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 CCDC43Q96MW1 224 aaKnown RBP3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 PRAM1Q96QH2 718 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 C19orf43Q9BQ61 176 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 TNFRSF19Q9NS68 423 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 PIGVQ9NUD9 493 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 RSPH14Q9UHP6 348 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 NARFQ9UHQ1 456 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 IKZF3Q9UKT9 509 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 SLC9A8Q9Y2E8 581 aa3.42□□□□□ -1.86
SMCHD1-204ENST00000581226 TRABD2BA6NFA1 517 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 SAP18O00422 153 aaKnown RBP3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 ZNF18P17022 549 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 KLK2P20151 261 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 UCP1P25874 307 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 ARHGDIAP52565 204 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 PPP1R3AQ16821 1122 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 RNF212Q495C1 297 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 ACER2Q5QJU3 275 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 OLFML2AQ68BL7 652 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 HSCBQ8IWL3 235 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 MRAPQ8TCY5 172 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 CRYGNQ8WXF5 182 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 BIRC7Q96CA5 298 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 TRPV6Q9H1D0 765 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 TMEM245Q9H330 911 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 MID1IP1Q9NPA3 183 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 EMCNQ9ULC0 261 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 FAM205AQ6ZU69 1335 aa3.41□□□□□ -1.86
SMCHD1-204ENST00000581226 ADAMTS9Q9P2N4 1935 aa3.4□□□□□ -1.86
SMCHD1-204ENST00000581226 A0A0A6YYD4 124 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 OAS1P00973 400 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 HIST1H2AGP0C0S8 130 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 TNFRSF4P43489 277 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 PITPNBP48739 271 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 HCFC1P51610 2035 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 ARF5P84085 180 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 CCZ1BP86790 482 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 CCZ1P86791 482 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 RPA4Q13156 261 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 TSTA3Q13630 321 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 SHROOM1Q2M3G4 852 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 HKDC1Q2TB90 917 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 C2orf76Q3KRA6 126 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 TAF3Q5VWG9 929 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 CCBE1Q6UXH8 406 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 HIST1H2ACQ93077 130 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 SLCO4A1Q96BD0 722 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 GPR174Q9BXC1 333 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 KCNMB3Q9NPA1 279 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 NRN1Q9NPD7 142 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 RAI14Q9P0K7 980 aa3.4□□□□□ -1.87
SMCHD1-204ENST00000581226 IGHV3OR16-12A0A075B7B8 117 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 FAM168BA1KXE4 195 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CCDC69A6NI79 296 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CCT8L1PA6NM43 557 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 A8MU10 97 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 KLLNB2CW77 178 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 TLR4O00206 839 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CYB561D2O14569 222 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 PRAMEF12O95522 483 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 APRTP07741 180 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 DNAH10OSP0CZ25 163 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CNN1P51911 297 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 GFPT1Q06210 699 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 ACTN3Q08043 901 aaPredicted RBP3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 PPP1R8Q12972 351 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 MICAQ29983 383 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 PRAMEF7Q5VXH5 474 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 MFSD7Q6UXD7 560 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CNTN4Q8IWV2 1026 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 SPC24Q8NBT2 197 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CABS1Q96KC9 395 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 CNOT6LQ96LI5 555 aaKnown RBP3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 ZNF560Q96MR9 790 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 SLITRK2Q9H156 845 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 NDUFA13Q9P0J0 144 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 SENP1Q9P0U3 644 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 COPS7AQ9UBW8 275 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 ENTPD4Q9Y227 616 aa3.39□□□□□ -1.87
SMCHD1-204ENST00000581226 MACROD2A1Z1Q3 448 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 EFCAB7A8K855 629 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 EI24O14681 340 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 CFLARO15519 480 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 HSF2BPO75031 334 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 PNPP00491 289 aa3.38□□□□□ -1.87
SMCHD1-204ENST00000581226 KRTAP1-4P0C5Y4 121 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms