RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 STSP08842 583 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 CT62P0C5K7 136 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 NTSP30990 170 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 NR0B1P51843 470 aaKnown RBP10.07□□□□□ -0.8
NDEL1-208ENST00000580237 RPL38P63173 70 aaKnown RBP10.07□□□□□ -0.8
NDEL1-208ENST00000580237 RAE1P78406 368 aaKnown RBP10.07□□□□□ -0.8
NDEL1-208ENST00000580237 EXOSC7Q15024 291 aaKnown RBP10.07□□□□□ -0.8
NDEL1-208ENST00000580237 LTB4RQ15722 352 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 PIGGQ5H8A4 983 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 SH2D4BQ5SQS7 431 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 PRAMEF20Q5VT98 475 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 GALNT18Q6P9A2 607 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 SLC22A16Q86VW1 577 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 HOMEZQ8IX15 550 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 FAM9CQ8IZT9 166 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 SLC15A4Q8N697 577 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 ADCY4Q8NFM4 1077 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 OR2M7Q8NG81 312 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 OR7G1Q8NGA0 311 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 OR5M3Q8NGP4 307 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 ZBTB9Q96C00 473 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 CNRIP1Q96F85 164 aaPredicted RBP10.07□□□□□ -0.8
NDEL1-208ENST00000580237 BBS4Q96RK4 519 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 FAM173AQ9BQD7 235 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 LRTM1Q9HBL6 345 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 TNFRSF12AQ9NP84 129 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 MYNNQ9NPC7 610 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 MAT2BQ9NZL9 334 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 HEY2Q9UBP5 337 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 PTGDR2Q9Y5Y4 395 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 NCKAP5O14513 1909 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 DOPEY1Q5JWR5 2465 aa10.07□□□□□ -0.8
NDEL1-208ENST00000580237 USP9YO00507 2555 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 A0A0G2JMM0 328 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 A0A1W2PPB8 328 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 A0A1W2PRS3 328 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 SERTM1A2A2V5 107 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 KIR3DP1A8MWS1 328 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CCL21O00585 134 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TP53I11O14683 189 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CTIFO43310 598 aaKnown RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ASNA1O43681 348 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ZNF354AO60765 605 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 LDLRP01130 860 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CHRNGP07510 517 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 RNF224P0DH78 156 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CCL3P10147 92 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ESRRAP11474 423 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 DDCP20711 480 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 SERPINB5P36952 375 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 DNASE1L1P49184 302 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 RPP38P78345 283 aaKnown RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 MRPS35P82673 323 aaKnown RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 HSF1Q00613 529 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 C2orf80Q0P641 193 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 FUT7Q11130 342 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 RPS6KA2Q15349 733 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 GALNTL6Q49A17 601 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ARL13AQ5H913 290 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 SLC22A10Q63ZE4 541 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 KANK2Q63ZY3 851 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 MTFR2Q6P444 385 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 FAM111BQ6SJ93 734 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 IKBIPQ70UQ0 350 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TRIM46Q7Z4K8 759 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 SIAH3Q8IW03 269 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ZFP62Q8NB50 900 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 OR9A2Q8NGT5 310 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 C16orf52Q8NHV5 167 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 FAM76AQ8TAV0 307 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TWIST2Q8WVJ9 160 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 PKNOX2Q96KN3 472 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 JSRP1Q96MG2 331 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ZIM3Q96PE6 472 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 ITPAQ9BY32 194 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TTTY12Q9BZ98 90 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 STMN4Q9H169 189 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 EXO5Q9H790 373 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 SLC35C2Q9NQQ7 365 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 DEPPQ9NTK1 212 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 RYDENQ9NUL5 291 aaKnown RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 C1orf109Q9NX04 203 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 EHD3Q9NZN3 535 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 PLEKHB1Q9UF11 243 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 PRODH2Q9UF12 536 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TINAGQ9UJW2 476 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CES1P1Q9UKY3 287 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 BOKQ9UMX3 212 aaPredicted RBP10.06□□□□□ -0.8
NDEL1-208ENST00000580237 CACNA1CQ13936 2221 aa10.06□□□□□ -0.8
NDEL1-208ENST00000580237 TMEM233B4DJY2 109 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 PRRG2O14669 202 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 ZG16O60844 167 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 SKAP2O75563 359 aaPredicted RBP10.05□□□□□ -0.8
NDEL1-208ENST00000580237 LRATO95237 230 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 NADKO95544 446 aaPredicted RBP10.05□□□□□ -0.8
NDEL1-208ENST00000580237 HSPA4LO95757 839 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 CLPSP04118 112 aa10.05□□□□□ -0.8
NDEL1-208ENST00000580237 TPOP07202 933 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms