RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 DEFB126Q9BYW3 111 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 TTTY12Q9BZ98 90 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PITHD1Q9GZP4 211 aaPredicted RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 VN1R1Q9GZP7 353 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 LACRTQ9GZZ8 138 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 OR52A5Q9H2C5 316 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 OCEL1Q9H607 264 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 CHODLQ9H9P2 273 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 NTN4Q9HB63 628 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PPANQ9NQ55 473 aaKnown RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 RPRD1BQ9NQG5 326 aaKnown RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 SMYD2Q9NRG4 433 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 DEPPQ9NTK1 212 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 C20orf96Q9NUD7 363 aaPredicted RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 TBC1D23Q9NUY8 699 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 INTS9Q9NV88 658 aaKnown RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 ETNK2Q9NVF9 386 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 INTS7Q9NVH2 962 aaKnown RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 SIRT5Q9NXA8 310 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PAQR5Q9NXK6 330 aaPredicted RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 GIN1Q9NXP7 522 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 KLHL28Q9NXS3 571 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 ZNF226Q9NYT6 803 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 TAS2R7Q9NYW3 318 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 WWOXQ9NZC7 414 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 KCMF1Q9P0J7 381 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 EXTL2Q9UBQ6 330 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 CD300AQ9UGN4 299 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 SLC7A8Q9UHI5 535 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 BAG5Q9UL15 447 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 KCNS2Q9ULS6 477 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PLAGL1Q9UM63 463 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 SPATA2Q9UM82 520 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 NFU1Q9UMS0 254 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PACSIN2Q9UNF0 486 aaPredicted RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 SNX6Q9UNH7 406 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 AP4E1Q9UPM8 1137 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 ERVK-11Q9UQG0 969 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 ASF1AQ9Y294 204 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 TDRKHQ9Y2W6 561 aaKnown RBP2.23□□□□□ -2.05
SNORD53-201ENST00000579969 TESMINQ9Y4I5 508 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PCDHGB1Q9Y5G3 927 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PCDHA3Q9Y5H8 950 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 WIF1Q9Y5W5 379 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PMF1-BGLAPU3KQ54 211 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 PRR14LQ5THK1 2151 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 FREM3P0C091 2139 aa2.23□□□□□ -2.05
SNORD53-201ENST00000579969 NINQ8N4C6 2090 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IGHV4-30-2A0A087WSY4 118 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 A0A096LNT2 108 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 A0A0A6YYC8 382 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 A0A0A6YYJ9 748 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 GLYATL1P3A0A0U1RQE8 302 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 LOC100289279A0A1B0GTE1 492 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ANKRD34BA5PLL1 514 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 KRT87PA6NCN2 255 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ARHGEF33A8MVX0 844 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 VSTM5A8MXK1 200 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 HSBP1L1C9JCN9 74 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SLCO1B7G3V0H7 640 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 G3V3Y1 287 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 H0YGG7 62 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 I3L1I5 382 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 LINC01387J3KSC0 135 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 FCHO1O14526 889 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 AP3D1O14617 1153 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 HS3ST1O14792 307 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SNPHO15079 494 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ANGPT2O15123 496 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MATN3O15232 486 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MAGEB3O15480 346 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 GPR39O43194 453 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 FOXS1O43638 330 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SSX4O60224 188 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 OR10H2O60403 315 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CIDEAO60543 219 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ICMTO60725 284 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 NOS1APO75052 506 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 NDUFS7O75251 213 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 ERN1O75460 977 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PSIP1O75475 530 aaKnown RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SERPINB7O75635 380 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CRTAMO95727 393 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 AP2A1O95782 977 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 GNA14O95837 355 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CLPTM1O96005 669 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PLGP00747 810 aaPredicted RBP2.22□□□□□ -2.05
SNORD53-201ENST00000579969 PLAUP00749 431 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 AGTP01019 485 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IGHV4-39P01824 125 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 SERPING1P05155 500 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IL6P05231 212 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 KRT8P05787 483 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CALB1P05937 261 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 MMP2P08253 660 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CYC1P08574 325 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 CELA3AP09093 270 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 FAM153BP0C7A2 387 aa2.22□□□□□ -2.05
SNORD53-201ENST00000579969 IGHV4-31P0DP07 118 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms