RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 SLC7A8Q9UHI5 535 aa13.05□□□□□ -0.32
CSNK1D-209ENST00000578904 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-209ENST00000578904 CEP295Q9C0D2 2601 aa13.05□□□□□ -0.32
CSNK1D-209ENST00000578904 BAHCC1Q9P281 2608 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 IGLV3-12A0A075B6K2 115 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 A0A087WV62 115 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 FAM220BPB1ANY3 271 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 C1QTNF9BB2RNN3 333 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 PCDH17O14917 1159 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 TLX3O43711 291 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 FGF17O60258 216 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 DNAJB6O75190 326 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 COQ9O75208 318 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 PDE5AO76074 875 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 AGR2O95994 175 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 IFNA16P05015 189 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 C1QTNF9P0C862 333 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 HOXB9P17482 250 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 CRATP43155 626 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 STT3AP46977 705 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 PRIM2P49643 509 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 IGLV3-21P80748 117 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 GNA13Q14344 377 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 SYT16Q17RD7 645 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 RABL3Q5HYI8 236 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 MLIPQ5VWP3 458 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 LCN10Q6JVE6 187 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 COX15Q7KZN9 410 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 OVCH1Q7RTY7 1134 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 SZRD1Q7Z422 152 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 IFNEQ86WN2 208 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 HPS6Q86YV9 775 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 OR4N5Q8IXE1 308 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 ZNF248Q8NDW4 579 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 OR10A6Q8NH74 314 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 SNIP1Q8TAD8 396 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 KCNE4Q8WWG9 221 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 METTL21AQ8WXB1 218 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 JADE3Q92613 823 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 STMN2Q93045 179 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 UCN3Q969E3 161 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 NKD1Q969G9 470 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 KIAA1143Q96AT1 154 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 ANKRD9Q96BM1 317 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 CCDC124Q96CT7 223 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 ELP4Q96EB1 424 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 NAF1Q96HR8 494 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 REXO5Q96IC2 774 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 CLPTM1LQ96KA5 538 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 SLC35G5Q96KT7 338 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 ART5Q96L15 291 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 CXorf36Q9H7Y0 433 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 KAT8Q9H7Z6 458 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 AKIRIN1Q9H9L7 192 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 SLAMF7Q9NQ25 335 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 DDX18Q9NVP1 670 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 MAGEL2Q9UJ55 1249 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 FAF1Q9UNN5 650 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 AHCTF1Q8WYP5 2266 aa13.04□□□□□ -0.32
CSNK1D-209ENST00000578904 AKAP13Q12802 2813 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 ELOVL7A1L3X0 281 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 PRORSD1PA6NEY8 169 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 DUXAA6NLW8 204 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 HEXBP07686 556 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 TNNI3P19429 210 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 TCN1P20061 433 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 TCN2P20062 427 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 DLSTP36957 453 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 GSK3BP49841 420 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 KHKP50053 298 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 CDK9P50750 372 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 RBBP4Q09028 425 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 DNASE1L3Q13609 305 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 CEACAM7Q14002 265 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 FLOT2Q14254 428 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 NCF4Q15080 339 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 RGNQ15493 299 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 TGIF1Q15583 401 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 PRSS53Q2L4Q9 553 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 GTDC1Q4AE62 458 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 MTX3Q5HYI7 312 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 INTS11Q5TA45 600 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 FAM180BQ6P0A1 224 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 ZCCHC12Q6PEW1 402 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 ZNF517Q6ZMY9 492 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 C6orf120Q7Z4R8 191 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 DHFR2Q86XF0 187 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 GALNT12Q8IXK2 581 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 MSRB3Q8IXL7 192 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 FAM13CQ8NE31 585 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 PLPP5Q8NEB5 264 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 NUP43Q8NFH3 380 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 OR9A2Q8NGT5 310 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 SUN3Q8TAQ9 357 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 STT3BQ8TCJ2 826 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 RIT1Q92963 219 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 UTP4Q969X6 686 aaKnown RBP13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 RBCK1Q9BYM8 510 aa13.03□□□□□ -0.32
CSNK1D-209ENST00000578904 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms