RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 HEPHL1Q6MZM0 1159 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 SLC30A6Q6NXT4 461 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 MED27Q6P2C8 311 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 TMEM81Q6P7N7 255 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 DGAT2L6Q6ZPD8 337 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ZNF662Q6ZS27 426 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 PLEKHM3Q6ZWE6 761 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 CHMP1BQ7LBR1 199 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 YRDCQ86U90 279 aaKnown RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 LAS2Q8IYD9 372 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 PDIK1LQ8N165 341 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ZCCHC7Q8N3Z6 543 aaKnown RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 FAM83FQ8NEG4 500 aaPredicted RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 OR14L1PQ8NHC6 308 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 SLC44A1Q8WWI5 657 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 LRRC39Q96DD0 335 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 WFIKKN1Q96NZ8 548 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 DERL2Q9GZP9 239 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 METTL7AQ9H8H3 244 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ACTR8Q9H981 624 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 LYARQ9NX58 379 aaKnown RBP8.19□□□□□ -1.1
SMG6-218ENST00000575454 NSMCE4AQ9NXX6 385 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 CFL2Q9Y281 166 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 DLGAP4Q9Y2H0 992 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ANK2Q01484 3957 aa8.19□□□□□ -1.1
SMG6-218ENST00000575454 ZNF407Q9C0G0 2248 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 GOLGA6L10A0A0M3HER8 536 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 FAM95CA0A1B0GW59 222 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 A0A1W2PNV4 684 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 C16orf97H3BN30 126 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TAPBPO15533 448 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TNFSF13O75888 250 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TGFB1P01137 390 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TP53P04637 393 aaPredicted RBP8.18□□□□□ -1.1
SMG6-218ENST00000575454 PCNAP12004 261 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 CD22P20273 847 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 PTX3P26022 381 aaPredicted RBP8.18□□□□□ -1.1
SMG6-218ENST00000575454 PIK3CBP42338 1070 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 SLCO1A2P46721 670 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 HSPA7P48741 367 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TAS2R39P59534 338 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 SRYQ05066 204 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 DMTNQ08495 405 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 FAM27E3Q08E93 113 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 MGAT5Q09328 741 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 CHIT1Q13231 466 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 E2F2Q14209 437 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 BCL2A1Q16548 175 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 KBTBD12Q3ZCT8 623 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 BICRALQ6AI39 1079 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 ADNP2Q6IQ32 1131 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 HMBOX1Q6NT76 420 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 ANGPTL8Q6UXH0 198 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TMEM64Q6YI46 380 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 LRRC70Q7Z2Q7 622 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 NUP54Q7Z3B4 507 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 MILR1Q7Z6M3 343 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 ZC3HC1Q86WB0 502 aaKnown RBP8.18□□□□□ -1.1
SMG6-218ENST00000575454 GRAMD2AQ8IUY3 354 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 GALNT12Q8IXK2 581 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 OR7G3Q8NG95 312 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 OR7G1Q8NGA0 311 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 PPP1R14CQ8TAE6 165 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 ANKRD49Q8WVL7 239 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 CAVIN3Q969G5 261 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TSPAN17Q96FV3 270 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 PBKQ96KB5 322 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 FAM111AQ96PZ2 611 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TMEM79Q9BSE2 394 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 LZTFL1Q9NQ48 299 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 ZNF701Q9NV72 531 aaPredicted RBP8.18□□□□□ -1.1
SMG6-218ENST00000575454 KLHL28Q9NXS3 571 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 TAS2R10Q9NYW0 307 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 SLC17A6Q9P2U8 582 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 CLCF1Q9UBD9 225 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 EXO1Q9UQ84 846 aaKnown RBP8.18□□□□□ -1.1
SMG6-218ENST00000575454 DNAJC13O75165 2243 aa8.18□□□□□ -1.1
SMG6-218ENST00000575454 HEATR5BQ9P2D3 2071 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 SAP18O00422 153 aaKnown RBP8.17□□□□□ -1.1
SMG6-218ENST00000575454 GNB5O14775 395 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 SNPHO15079 494 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ACOX3O15254 700 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
SMG6-218ENST00000575454 PRAMEF4O60810 478 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 PPM1BO75688 479 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 SMNDC1O75940 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
SMG6-218ENST00000575454 CLPSP04118 112 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ABCB1P08183 1280 aaPredicted RBP8.17□□□□□ -1.1
SMG6-218ENST00000575454 NR2F6P10588 404 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 POU2F1P14859 743 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 ABCD3P28288 659 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 UGT2B10P36537 528 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 KCNJ5P48544 419 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 NR1H2P55055 460 aa8.17□□□□□ -1.1
SMG6-218ENST00000575454 EEFSECP57772 596 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms