RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 TMEM125Q96AQ2 219 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 GAL3ST4Q96RP7 486 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 EPN3Q9H201 632 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 MEAF6Q9HAF1 191 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 MAT2BQ9NZL9 334 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 MAPRE3Q9UPY8 281 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 ERVK-11Q9UQG0 969 aa14.11□□□□□ -0.15
LITAF-217ENST00000575426 A8MVJ9 347 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 MYO1GB0I1T2 1018 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 PDPK1O15530 556 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 TBX19O60806 448 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 SORBS2O94875 1100 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 SLITRK5O94991 958 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 TRHRP34981 398 aaPredicted RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 DUSP2Q05923 314 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 LTB4RQ15722 352 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 CEBPEQ15744 281 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 MPEG1Q2M385 716 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 RPUSD3Q6P087 351 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 OPN5Q6U736 354 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 WDR75Q8IWA0 830 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 GPALPP1Q8IXQ4 340 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 LRRC34Q8IZ02 419 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 SLC15A4Q8N697 577 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 ARFGAP2Q8N6H7 521 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 Q8NA96 180 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 TMEM178AQ8NBL3 297 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 OR9A2Q8NGT5 310 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 ZFP28Q8NHY6 868 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 ZNF675Q8TD23 568 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 KAT2AQ92830 837 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 ERP27Q96DN0 273 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 ZNF764Q96H86 408 aaPredicted RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 SIGLEC12Q96PQ1 595 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 WWTR1Q9GZV5 400 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 RYDENQ9NUL5 291 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 HPF1Q9NWY4 346 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 PRODH2Q9UF12 536 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 EXO1Q9UQ84 846 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 PCDHGA10Q9Y5H3 936 aa14.1□□□□□ -0.15
LITAF-217ENST00000575426 COPG1Q9Y678 874 aaKnown RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 NUP214P35658 2090 aaPredicted RBP14.1□□□□□ -0.15
LITAF-217ENST00000575426 TMEM200CA6NKL6 621 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 PRPS1L1P21108 318 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 PTGER1P34995 402 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 GPC1P35052 558 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 MANFP55145 182 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 MLLT10P55197 1068 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 TLE1Q04724 770 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 MGAT2Q10469 447 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 EXOSC7Q15024 291 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 EBPQ15125 230 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 INPP5JQ15735 1006 aaPredicted RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 MAPKAPK3Q16644 382 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 TRMT12Q53H54 448 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 PIGGQ5H8A4 983 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 NXNQ6DKJ4 435 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 SPINK14Q6IE38 97 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 SLC25A25Q6KCM7 469 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ANKRD26P1Q6NSI1 321 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 IL20RBQ6UXL0 311 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 C16orf47Q6ZP98 133 aaPredicted RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 TAGAPQ8N103 731 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 CYP4Z2PQ8N1L4 340 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 CISD2Q8N5K1 135 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 NATD1Q8N6N6 113 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ZNF615Q8N8J6 731 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 FAM98AQ8NCA5 519 aaKnown RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 MDS2Q8NDY4 140 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 OR52R1Q8NGF1 315 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 CPT1CQ8TCG5 803 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 CKAP2Q8WWK9 683 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 TP53INP1Q96A56 240 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 CTHRC1Q96CG8 243 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ZBED6CLQ96FA7 236 aaPredicted RBP14.09□□□□□ -0.15
LITAF-217ENST00000575426 MAGEB18Q96M61 343 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 C7orf26Q96N11 449 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 RASL10BQ96S79 203 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 MED4Q9NPJ6 270 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 KLHL1Q9NR64 748 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 AGPAT4Q9NRZ5 378 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ATAD3AQ9NVI7 634 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ASIC5Q9NY37 505 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 ZNF639Q9UID6 485 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 PCDHGB6Q9Y5F9 930 aa14.09□□□□□ -0.15
LITAF-217ENST00000575426 SDHDO14521 159 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 SCAMP2O15127 329 aaKnown RBP14.08□□□□□ -0.16
LITAF-217ENST00000575426 SLC25A12O75746 678 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 RASAL1O95294 804 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 SP1P08047 785 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 G6PDP11413 515 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 PCSK2P16519 638 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 S1PR1P21453 382 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 SOX3P41225 446 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 NR0B1P51843 470 aaKnown RBP14.08□□□□□ -0.16
LITAF-217ENST00000575426 CLDN8P56748 225 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 NRG3P56975 720 aa14.08□□□□□ -0.16
LITAF-217ENST00000575426 MRPS35P82673 323 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms