RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 CFL2Q9Y281 166 aa13.51□□□□□ -0.25
NPLOC4-218ENST00000574964 COPG1Q9Y678 874 aaKnown RBP13.51□□□□□ -0.25
NPLOC4-218ENST00000574964 ASPMQ8IZT6 3477 aa13.51□□□□□ -0.25
NPLOC4-218ENST00000574964 HRKO00198 91 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 CPSF4O95639 269 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 C6orf47O95873 294 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 ALPPP05187 535 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 IL6P05231 212 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 PGRP06401 933 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 GPX3P22352 226 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 IL12AP29459 219 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 GPR143P51810 404 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 POLR2JP52435 117 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 DGKQP52824 942 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 KCNK10P57789 538 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 FUT7Q11130 342 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 EXOSC7Q15024 291 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 MPEG1Q2M385 716 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 AGKQ53H12 422 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 TRMT12Q53H54 448 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 TMEM107Q6UX40 140 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 SZRD1Q7Z422 152 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 RPS19BP1Q86WX3 136 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 FDCSPQ8NFU4 85 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 OR8J2Q8NGG1 315 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 OR9I1Q8NGQ6 314 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 THAP3Q8WTV1 239 aaPredicted RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF354BQ96LW1 612 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 OR52E6Q96RD3 313 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 GAL3ST4Q96RP7 486 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 SEMA4CQ9C0C4 833 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 C3orf14Q9HBI5 128 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 DDX18Q9NVP1 670 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 FAM120CQ9NX05 1096 aaKnown RBP13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 CCDC167Q9P0B6 97 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 ABI3Q9P2A4 366 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 SNX8Q9Y5X2 465 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 USP24Q9UPU5 2620 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 CELSR3Q9NYQ7 3312 aa13.5□□□□□ -0.25
NPLOC4-218ENST00000574964 EML6Q6ZMW3 1958 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 PRSS51A0A1B0GVH4 220 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 FAM234BA2RU67 622 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 OR6C76A6NM76 312 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 NR5A2O00482 541 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 SNX3O60493 162 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 PRAMEF2O60811 474 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 COQ9O75208 318 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 IGKV3-11P04433 115 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 SOAT1P35610 550 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 MC3RP41968 323 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 FRKP42685 505 aaPredicted RBP13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 MRPL19P49406 292 aaKnown RBP13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 RNF4P78317 190 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 MGAT2Q10469 447 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 MLC1Q15049 377 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 MEP1AQ16819 746 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 SPDYE7PQ495Y7 208 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 CRB2Q5IJ48 1285 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 ABHD17BQ5VST6 288 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 FCRLBQ6BAA4 426 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 ISLR2Q6UXK2 745 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 LINC00696Q6ZRV3 163 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 ANKRD46Q86W74 232 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 OR7G2Q8NG99 324 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 OR52R1Q8NGF1 315 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 OR4A15Q8NGL6 344 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 OR8K3Q8NH51 312 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 CTHRC1Q96CG8 243 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 ERP27Q96DN0 273 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 ELP4Q96EB1 424 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 CDCP1Q9H5V8 836 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 RMND5AQ9H871 391 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 PRODH2Q9UF12 536 aa13.49□□□□□ -0.25
NPLOC4-218ENST00000574964 C2orf92A0A1B0GVN3 265 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CCDC154A6NI56 674 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PLOD2O00469 737 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 RNASET2O00584 256 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 FCHO1O14526 889 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 EMC8O43402 210 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PLOD3O60568 738 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CCDC22O60826 627 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CEACAM4O75871 244 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CDK9P50750 372 aaKnown RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PRKAG1P54619 331 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 SLC37A1P57057 533 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PRR5P85299 388 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 LRRC74AQ0VAA2 488 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 KCNAB2Q13303 367 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 LINC00303Q3SY05 128 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 TIGD2Q4W5G0 525 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CLECL1Q8IZS7 167 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 PSMF1Q92530 271 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 CCT8L2Q96SF2 557 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 ADNPQ9H2P0 1102 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 EPS8L2Q9H6S3 715 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 ZNF552Q9H707 407 aaPredicted RBP13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 ANKRA2Q9H9E1 313 aa13.48□□□□□ -0.25
NPLOC4-218ENST00000574964 NEUROD4Q9HD90 331 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms