RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ANXA4P09525 319 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GIFP27352 417 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ACSL1P33121 698 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ARHGDIBP52566 201 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 KIAA1024LP59773 190 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 CHIT1Q13231 466 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 TRIM40Q6P9F5 258 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 C11orf88Q6PI97 169 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 IL20RBQ6UXL0 311 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 NPAS4Q8IUM7 802 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MARVELD3Q96A59 401 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 LRR1Q96L50 414 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 SIGLEC11Q96RL6 698 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 PIP5K1AQ99755 562 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GDF15Q99988 308 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 METTL17Q9H7H0 456 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MGAT4BQ9UQ53 548 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ANGPT4Q9Y264 503 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 DHRS7Q9Y394 339 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 SLC38A8A6NNN8 435 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GASTP01350 101 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 RRASP10301 218 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 RAB3AP20336 220 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GPR85P60893 370 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 RBBP4Q09028 425 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 DSG2Q14126 1118 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 TUSC1Q2TAM9 212 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MEDAGQ5VYS4 303 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GPR155Q7Z3F1 870 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 SERPINA9Q86WD7 417 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MS4A15Q8N5U1 240 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 OR8J1Q8NGP2 316 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MOSPD2Q8NHP6 518 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 KIAA1143Q96AT1 154 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MED8Q96G25 268 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF578Q96N58 590 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MARVELD1Q9BSK0 173 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 C1QTNF3Q9BXJ4 246 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ACSL6Q9UKU0 697 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 COPS3Q9UNS2 423 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 COL4A3Q01955 1670 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 TNRC18O15417 2968 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 GLYATL1P3A0A0U1RQE8 302 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 F5H5T6 163 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 PGRMC2O15173 223 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 SGTAO43765 313 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 KCNJ13O60928 360 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 NME6O75414 186 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 IGFBP1P08833 259 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 KCNJ10P78508 379 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 CDK6Q00534 326 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ACVR1Q04771 509 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 VEZF1Q14119 521 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 XKR6Q5GH73 641 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 CTSL3PQ5NE16 218 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MTFR2Q6P444 385 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF730Q6ZMV8 503 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 LIX1LQ8IVB5 337 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ADGRF3Q8IZF5 1079 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 HS6ST3Q8IZP7 471 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ZBTB2Q8N680 514 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 FBXO22Q8NEZ5 403 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 HERVK_113Q902F9 699 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 SLC22A12Q96S37 553 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF436Q9C0F3 470 aaPredicted RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 NANSQ9NR45 359 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 TRPS1Q9UHF7 1281 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 EXO1Q9UQ84 846 aaKnown RBP9.1□□□□□ -0.95
CCDC40-212ENST00000574799 CACNG2Q9Y698 323 aa9.1□□□□□ -0.95
CCDC40-212ENST00000574799 MYOFQ9NZM1 2061 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 C2orf78A6NCI8 922 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 OR6C75A6NL08 312 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 TRIM77I1YAP6 450 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 COCHO43405 550 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 HLA-DPB1P04440 258 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 CD3GP09693 182 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 EPORP19235 508 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 CR2P20023 1033 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 PTSQ03393 145 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 RING1Q06587 406 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 PCDH1Q08174 1060 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 OPCMLQ14982 345 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 GPR139Q6DWJ6 353 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 WASH2PQ6VEQ5 465 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 FAM124AQ86V42 546 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 ADGRG3Q86Y34 549 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 RPLP0P6Q8NHW5 317 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 OR4K3Q96R72 315 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 TEX12Q9BXU0 123 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 FBXO44Q9H4M3 255 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 EMC7Q9NPA0 242 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 FAM120CQ9NX05 1096 aaKnown RBP9.09□□□□□ -0.95
CCDC40-212ENST00000574799 CPNE7Q9UBL6 633 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 REV1Q9UBZ9 1251 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 SLC13A4Q9UKG4 626 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 PCDHB1Q9Y5F3 818 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 A0A1B0GVM2 712 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 ZNF840PA6NDX5 716 aa9.09□□□□□ -0.95
CCDC40-212ENST00000574799 GATBO75879 557 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms