RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SLC6A19Q695T7 634 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 OGFOD2Q6N063 350 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 TUBA3EQ6PEY2 450 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 OPN5Q6U736 354 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 LARP4Q71RC2 724 aaKnown RBP eCLIP11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 GPALPP1Q8IXQ4 340 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 DND1Q8IYX4 353 aaKnown RBP11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 TAGAPQ8N103 731 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF321PQ8N8H1 164 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 ADCY4Q8NFM4 1077 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 CEP70Q8NHQ1 597 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 ASB15Q8WXK1 588 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 TMEM125Q96AQ2 219 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 CTHRC1Q96CG8 243 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 C5orf34Q96MH7 638 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 GAL3ST4Q96RP7 486 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 DPY30Q9C005 99 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 USH1CQ9Y6N9 552 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 BOD1L1Q8NFC6 3051 aa11.85□□□□□ -0.51
TRAPPC1-206ENST00000573989 GOLGA8QA0A0J9YX86 632 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 GOLGA8OA6NCC3 632 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 TTLL8A6PVC2 850 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 A8MVJ9 347 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 CAPN14A8MX76 684 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 GOLGA8NF8WBI6 632 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 HRKO00198 91 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 WWP2O00308 870 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 POLR3GO15318 223 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 SUV39H1O43463 412 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRKNO60260 465 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 COQ9O75208 318 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR2J2O76002 312 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 IFI6P09912 130 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 CT62P0C5K7 136 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 EPHA3P29320 983 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 TRHRP34981 398 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 GPC1P35052 558 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 CD97P48960 835 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 HLCSP50747 726 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 CLNS1AP54105 237 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 NRG3P56975 720 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 C21orf58P58505 322 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 DCAF7P61962 342 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 RPS6KA2Q15349 733 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR1C1Q15619 314 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 DPY19L1Q2PZI1 675 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 ZNF628Q5EBL2 1059 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 FAM111BQ6SJ93 734 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 FAM47EQ6ZV65 393 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 PRICKLE2Q7Z3G6 844 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 C9orf40Q8IXQ3 194 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 AMER2Q8N7J2 671 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 TMEM178AQ8NBL3 297 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 C17orf47Q8NEP4 570 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 OR9A2Q8NGT5 310 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 ACTRT2Q8TDY3 377 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 DOK4Q8TEW6 326 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 TP53INP1Q96A56 240 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 MAELQ96JY0 434 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 AMDHD1Q96NU7 426 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 NPAS2Q99743 824 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 WWTR1Q9GZV5 400 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 GLIPR2Q9H4G4 154 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 SLCO1B3Q9NPD5 702 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 ACSS1Q9NUB1 689 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 HPF1Q9NWY4 346 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 TAS2R9Q9NYW1 312 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 LRFN1Q9P244 771 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 EXO1Q9UQ84 846 aaKnown RBP11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 ERVK-11Q9UQG0 969 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 PCDHGB6Q9Y5F9 930 aa11.84□□□□□ -0.51
TRAPPC1-206ENST00000573989 A0A087WV62 115 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 PLOD3O60568 738 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 C1QL1O75973 258 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 F10P00742 488 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 IDO1P14902 403 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 S1PR1P21453 382 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 CD96P40200 585 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 TMED10P49755 219 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 DIO3P55073 304 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 PSPHP78330 225 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 MRPS35P82673 323 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 SRSF11Q05519 484 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 DUSP2Q05923 314 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 MGAT2Q10469 447 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 EBPQ15125 230 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 LTB4RQ15722 352 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 INAQ16352 499 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 LSM12Q3MHD2 195 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 PLEKHN1Q494U1 663 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 TRMT12Q53H54 448 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 PIGGQ5H8A4 983 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF766Q5HY98 468 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ANKRD26P1Q6NSI1 321 aa11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 RPUSD3Q6P087 351 aaKnown RBP11.83□□□□□ -0.52
TRAPPC1-206ENST00000573989 ZNF605Q86T29 641 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms