RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FAM173AQ9BQD7 235 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 ACPTQ9BZG2 426 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 IL1RL2Q9HB29 575 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 SACM1LQ9NTJ5 587 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 MKS1Q9NXB0 559 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 HEY2Q9UBP5 337 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 MCM8Q9UJA3 840 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 CSMD2Q7Z408 3487 aa15.94■□□□□ 0.14
SMG6-212ENST00000573153 DNAJC13O75165 2243 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 PDE9AO76083 593 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 HTR1EP28566 365 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 MAGEA5P43359 124 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 KIR3DL1P43629 444 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 FOXA1P55317 472 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 VSNL1P62760 191 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 NTRK2Q16620 822 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 FNDC7Q5VTL7 733 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 WDR93Q6P2C0 686 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 GALNT18Q6P9A2 607 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 XKRXQ6PP77 449 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 TMEM64Q6YI46 380 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 RNF111Q6ZNA4 994 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 RGS9BPQ6ZS82 235 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 FRMD7Q6ZUT3 714 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 TRILQ7L0X0 811 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 GALNT12Q8IXK2 581 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 C1orf52Q8N6N3 182 aaKnown RBP15.93■□□□□ 0.14
SMG6-212ENST00000573153 SLC22A8Q8TCC7 542 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 AENQ8WTP8 325 aaKnown RBP15.93■□□□□ 0.14
SMG6-212ENST00000573153 MARVELD3Q96A59 401 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 CNRIP1Q96F85 164 aaPredicted RBP15.93■□□□□ 0.14
SMG6-212ENST00000573153 KCNA7Q96RP8 456 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 ZNF703Q9H7S9 590 aaPredicted RBP15.93■□□□□ 0.14
SMG6-212ENST00000573153 OXSMQ9NWU1 459 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 MAT2BQ9NZL9 334 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 PDZD2O15018 2839 aa15.93■□□□□ 0.14
SMG6-212ENST00000573153 ABCA12Q86UK0 2595 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 DCHS2Q6V1P9 2916 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 HNRNPRO43390 633 aaKnown RBP15.92■□□□□ 0.14
SMG6-212ENST00000573153 CDC40O60508 579 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMG6-212ENST00000573153 CBX7O95931 251 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 ATP1B1P05026 303 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 PORP16435 677 aaPredicted RBP15.92■□□□□ 0.14
SMG6-212ENST00000573153 KRT4P19013 534 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 GPX3P22352 226 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 HMOX2P30519 316 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 XKP51811 444 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 CASP6P55212 293 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 PRSS53Q2L4Q9 553 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 SPIN4Q56A73 249 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 RTL6Q6ICC9 239 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 FAM180BQ6P0A1 224 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 ARHGAP11AQ6P4F7 1023 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 EMBQ6PCB8 327 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 FAM111BQ6SJ93 734 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 GK5Q6ZS86 529 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 SLC29A4Q7RTT9 530 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 LRRC25Q8N386 305 aaPredicted RBP15.92■□□□□ 0.14
SMG6-212ENST00000573153 FBXW8Q8N3Y1 598 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 FAM109AQ8N4B1 249 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 C17orf47Q8NEP4 570 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 OR7G1Q8NGA0 311 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 TP53INP1Q96A56 240 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 GAL3ST4Q96RP7 486 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 TREX2Q9BQ50 279 aaPredicted RBP15.92■□□□□ 0.14
SMG6-212ENST00000573153 FAIM2Q9BWQ8 316 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 TRIM8Q9BZR9 551 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 C12orf65Q9H3J6 166 aaKnown RBP15.92■□□□□ 0.14
SMG6-212ENST00000573153 SPRR3Q9UBC9 169 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 LGALS13Q9UHV8 139 aa15.92■□□□□ 0.14
SMG6-212ENST00000573153 GOLGA6L10A6NI86 522 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 COPEO14579 308 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 PRRG2O14669 202 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 CLDN14O95500 239 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 TPOP07202 933 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 GSTM5P46439 218 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 NAGLUP54802 743 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 MAP4K2Q12851 820 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 LTB4RQ15722 352 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 PRAMEF20Q5VT98 475 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 FAM47EQ6ZV65 393 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 ZNF295-AS1Q8N0V1 137 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 CCNYL1Q8N7R7 359 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 CAVIN3Q969G5 261 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 APIPQ96GX9 242 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 SHCBP1LQ9BZQ2 653 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 OR10A5Q9H207 317 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 MID1IP1Q9NPA3 183 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 PNPLA3Q9NST1 481 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 TNFRSF10DQ9UBN6 386 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 MID2Q9UJV3 735 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 PSME2Q9UL46 239 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 TIMM22Q9Y584 194 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 FAM215AQ9Y5M1 114 aa15.91■□□□□ 0.14
SMG6-212ENST00000573153 TRIM3O75382 744 aaPredicted RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 LRATO95237 230 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 ESRRAP11474 423 aaPredicted RBP15.9■□□□□ 0.14
SMG6-212ENST00000573153 DRD2P14416 443 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 CPA3P15088 417 aa15.9■□□□□ 0.14
SMG6-212ENST00000573153 CSNK2A2P19784 350 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms