RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 PLET1Q6UQ28 207 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 WASH2PQ6VEQ5 465 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF607Q96SK3 696 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 PRR14Q9BWN1 585 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 EGLN3Q9H6Z9 239 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 ANKRA2Q9H9E1 313 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 SIRT3Q9NTG7 399 aaPredicted RBP16.52■□□□□ 0.23
SCARF1-205ENST00000571272 HCFC1R1Q9NWW0 138 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 TRPC4Q9UBN4 977 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 FBXW2Q9UKT8 454 aa16.52■□□□□ 0.23
SCARF1-205ENST00000571272 PDE9AO76083 593 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 ALX3O95076 343 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 ALPPP05187 535 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 CCR2P41597 374 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 MAPK9P45984 424 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 BNC1Q01954 994 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 P2RY14Q15391 338 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 PLK5Q496M5 336 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 HSDL2Q6YN16 418 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 YIPF7Q8N8F6 280 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 NLGN4YQ8NFZ3 816 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-205ENST00000571272 SMPDL3AQ92484 453 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 SLA2Q9H6Q3 261 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 SRRDQ9UH36 339 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 IL36AQ9UHA7 158 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 ASF1AQ9Y294 204 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 FEZF1A0PJY2 475 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 KPNA3O00505 521 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-205ENST00000571272 MMP12P39900 470 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 CCT3P49368 545 aaKnown RBP16.51■□□□□ 0.23
SCARF1-205ENST00000571272 FABP5Q01469 135 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 TATDN3Q17R31 274 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 RNLSQ5VYX0 342 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 DPPA4Q7L190 304 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 LSRQ86X29 649 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-205ENST00000571272 RNFT2Q96EX2 444 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 FUZQ9BT04 418 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF717Q9BY31 904 aaPredicted RBP16.51■□□□□ 0.23
SCARF1-205ENST00000571272 TMEM245Q9H330 911 aa16.51■□□□□ 0.23
SCARF1-205ENST00000571272 SLC30A4O14863 429 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 CASKO14936 926 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 HPGDSO60760 199 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 NCR1O76036 304 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 NR2F1P10589 423 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 SLC2A2P11168 524 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 SOX18P35713 384 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF658BQ4V348 819 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF805Q5CZA5 627 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 LY6G5CQ5SRR4 150 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 LCN1P1Q5VSP4 162 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 CNIH2Q6PI25 160 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF730Q6ZMV8 503 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 LHFPL3Q86UP9 236 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 Q8N402 240 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 FBXO15Q8NCQ5 510 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 C19orf18Q8NEA5 215 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 OR7G1Q8NGA0 311 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 OR6T1Q8NGN1 323 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 JPH3Q8WXH2 748 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 YIPF4Q9BSR8 244 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ZSCAN32Q9NX65 697 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 MAP4K2Q12851 820 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ZNF628Q5EBL2 1059 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 TRIQKQ629K1 86 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 PPP2R2DQ66LE6 453 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 OR5AR1Q8NGP9 310 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 IRF7Q92985 503 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 UBE2E3Q969T4 207 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 DCLRE1CQ96SD1 692 aaKnown RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 CUEDC1Q9NWM3 386 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 TEX10Q9NXF1 929 aaPredicted RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 AHSPQ9NZD4 102 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 PCDH10Q9P2E7 1040 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 ACAD8Q9UKU7 415 aa16.5■□□□□ 0.23
SCARF1-205ENST00000571272 SF3B6Q9Y3B4 125 aaKnown RBP16.5■□□□□ 0.23
SCARF1-205ENST00000571272 FAM25AB3EWG3 89 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 FAM25CB3EWG5 89 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 FAM25GB3EWG6 89 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 PI15O43692 258 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 LILRB5O75023 590 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 POP7O75817 140 aaKnown RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 INHAP05111 366 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 SYN1P17600 705 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 PRKAG1P54619 331 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 SMIM11AP58511 58 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 EFR3AQ14156 821 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 INSL4Q14641 139 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 GPR19Q15760 415 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 CLEC12AQ5QGZ9 265 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 KHDRBS2Q5VWX1 349 aaKnown RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 PARS2Q7L3T8 475 aaKnown RBP16.49■□□□□ 0.23
SCARF1-205ENST00000571272 TBC1D19Q8N5T2 526 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 ANKRD53Q8N9V6 530 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 OR51I1Q9H343 314 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 NEUROD4Q9HD90 331 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 MAN2C1Q9NTJ4 1040 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 NLKQ9UBE8 527 aa16.49■□□□□ 0.23
SCARF1-205ENST00000571272 TAC3Q9UHF0 121 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms