RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 HPP00738 406 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 CELA2AP08217 269 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 SDC1P18827 310 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 PRPH2P23942 346 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 PIK3R1P27986 724 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 MAPK1P28482 360 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 EPHA3P29320 983 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 PTGER1P34995 402 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 FEN1P39748 380 aaKnown RBP12.39□□□□□ -0.43
CCDC40-205ENST00000571028 Q0VFX4 171 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 KIAA0040Q15053 153 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 BTBD16Q32M84 506 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 RNF165Q6ZSG1 346 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 LIX1Q8N485 282 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 OR4K14Q8NGD5 310 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 TANKQ92844 425 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 KLHL29Q96CT2 875 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 DGAT2Q96PD7 388 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 LPAR4Q99677 370 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 CCT7Q99832 543 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 ZNF700Q9H0M5 742 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 MIEF1Q9NQG6 463 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 ABI3Q9P2A4 366 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 PTGFRNQ9P2B2 879 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 VTI1BQ9UEU0 232 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 USH1CQ9Y6N9 552 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 PCNX1Q96RV3 2341 aa12.39□□□□□ -0.43
CCDC40-205ENST00000571028 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 TRPC5OSA6NMA1 111 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 C19orf84I3L1E1 186 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SDHDO14521 159 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 GPR75O95800 540 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 VIMP08670 466 aaKnown RBP12.38□□□□□ -0.43
CCDC40-205ENST00000571028 BCKDHAP12694 445 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 CD99P14209 185 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 DRD2P14416 443 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 ALOX15P16050 662 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-205ENST00000571028 LBPP18428 481 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 TNFSF10P50591 281 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 XKP51811 444 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 GYS2P54840 703 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SERTAD2Q14140 314 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 HEPACAMQ14CZ8 416 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SLC9B1Q4ZJI4 515 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 ANKRD26P1Q6NSI1 321 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 GALNT18Q6P9A2 607 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 MAVSQ7Z434 540 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 KBTBD2Q8IY47 623 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 DNAJB8Q8NHS0 232 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 C11orf24Q96F05 449 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-205ENST00000571028 RBM18Q96H35 190 aaKnown RBP12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 TUBB6Q9BUF5 446 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 MEAF6Q9HAF1 191 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 SIRT5Q9NXA8 310 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 PLA2G3Q9NZ20 509 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 UTS2RQ9UKP6 389 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 EIF3LQ9Y262 564 aaKnown RBP12.38□□□□□ -0.43
CCDC40-205ENST00000571028 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 CLDN16Q9Y5I7 305 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 ABCA2Q9BZC7 2435 aa12.38□□□□□ -0.43
CCDC40-205ENST00000571028 A8MUI8 341 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 C17orf105B2RV13 164 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 CYC1P08574 325 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 G6PDP11413 515 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 NT5EP21589 574 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
CCDC40-205ENST00000571028 NME5P56597 212 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 ADORA2A-AS1P86434 159 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 PLIN5Q00G26 463 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 FAM71E1Q6IPT2 247 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 SLC48A1Q6P1K1 146 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
CCDC40-205ENST00000571028 MARK4Q96L34 752 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 OR8D2Q9GZM6 311 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 NPHS2Q9NP85 383 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 MYNNQ9NPC7 610 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 TINAGQ9UJW2 476 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 PSME2Q9UL46 239 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 CLCA3PQ9Y6N3 262 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 ZNF780BQ9Y6R6 833 aa12.37□□□□□ -0.43
CCDC40-205ENST00000571028 PKDREJQ9NTG1 2253 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 SAGE2PA6NJ88 616 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 NPIPB8E9PQR5 432 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 POLR3GO15318 223 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 EDF1O60869 148 aaKnown RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 F10P00742 488 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 PRPS2P11908 318 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 CPMP14384 443 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 COX7A2P14406 83 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 HOXB4P17483 251 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 DDCP20711 480 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 MST1P26927 711 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 KIR3DL1P43629 444 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 STT3AP46977 705 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 ST13P50502 369 aaKnown RBP12.36□□□□□ -0.43
CCDC40-205ENST00000571028 AQP5P55064 265 aa12.36□□□□□ -0.43
CCDC40-205ENST00000571028 DIO3P55073 304 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms