RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 SMC6Q96SB8 1091 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 CHP1Q99653 195 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZNF670Q9BS34 389 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 RBM4Q9BWF3 364 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 GTPBP2Q9BX10 602 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 ITPAQ9BY32 194 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TM6SF2Q9BZW4 377 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 TRIM7Q9C029 511 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 SLC39A8Q9C0K1 460 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ZDHHC6Q9H6R6 413 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 LRRC19Q9H756 370 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ATP13A3Q9H7F0 1226 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 GPATCH2LQ9NWQ4 482 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 AMACRQ9UHK6 382 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 ACAD8Q9UKU7 415 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 NENFQ9UMX5 172 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.69□□□□□ -1.82
NUP88-202ENST00000570937 CACNA1HO95180 2353 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 MYOFQ9NZM1 2061 aa3.69□□□□□ -1.82
NUP88-202ENST00000570937 LAMA1P25391 3075 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LRRD1A4D1F6 860 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TMEM8BA6NDV4 472 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 BTNL10A8MVZ5 291 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TLR4O00206 839 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 FPGTO14772 594 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LATO43561 262 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PSTPIP1O43586 416 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PLPP2O43688 288 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PCDH7O60245 1069 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 OR2C1O95371 312 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CGAP01215 116 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TFAP2AP05549 437 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 UGT2B4P06133 528 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 IGHV4-34P06331 123 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CEACAM1P13688 526 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ADRB3P13945 408 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CCNB1P14635 433 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CSRP1P21291 193 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 HNRNPA2B1P22626 353 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 KDELR1P24390 212 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 IL4RP24394 825 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 DRD3P35462 400 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GARSP41250 739 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 CSNK1EP49674 416 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 NR0B1P51843 470 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 SLC25A11Q02978 314 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 BCL2L1Q07817 233 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 DPYSL3Q14195 570 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PAFAH1B3Q15102 231 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 UGP2Q16851 508 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 HLA-BQ31612 363 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TMEM30BQ3MIR4 351 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 POM121L1PQ3SYA9 428 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TECRLQ5HYJ1 363 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GKAP1Q5VSY0 366 aaPredicted RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 TCEAL6Q6IPX3 200 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GAGE2AQ6NT46 116 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 C11orf63Q6NUN7 778 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 KLHL35Q6PF15 583 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CEACAM20Q6UY09 585 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LEKR1Q6ZMV7 388 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ZNF534Q76KX8 674 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 HORMAD1Q86X24 394 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TICAM1Q8IUC6 712 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CCDC50Q8IVM0 306 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 GBGT1Q8N5D6 347 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 MINDY1Q8N5J2 469 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 RNF10Q8N5U6 811 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 C1orf52Q8N6N3 182 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 UBL4BQ8N7F7 174 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 SPC24Q8NBT2 197 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CCNYQ8ND76 341 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CCDC112Q8NEF3 446 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TRIM58Q8NG06 486 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 CXorf40AQ8TE69 158 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PPP4R1Q8TF05 950 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TM9SF4Q92544 642 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 P3H4Q92791 437 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TCEAL3Q969E4 200 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 FAM131CQ96AQ9 280 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LRRC45Q96CN5 670 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 RMDN1Q96DB5 314 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 LGALS12Q96DT0 336 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ELMOD3Q96FG2 381 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 STAMBPL1Q96FJ0 436 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PGAM5Q96HS1 289 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 RBM41Q96IZ5 413 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 MPP4Q96JB8 637 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 ZNF354BQ96LW1 612 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TSGA13Q96PP4 275 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 NUDCD1Q96RS6 583 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 PEBP4Q96S96 227 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 SLX1AQ9BQ83 275 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 SLC17A9Q9BYT1 436 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 TSGA10Q9BZW7 698 aa3.68□□□□□ -1.82
NUP88-202ENST00000570937 POLR1EQ9GZS1 481 aaKnown RBP3.68□□□□□ -1.82
NUP88-202ENST00000570937 ERVMER34-1Q9H9K5 563 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms