RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OR4F6Q8NGB9 312 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 NRGNQ92686 78 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 FRG2BQ96QU4 278 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 HBEGFQ99075 208 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 NTMT1Q9BV86 223 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 CES1P1Q9UKY3 287 aa12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 TNPO3Q9Y5L0 923 aaKnown RBP12.71□□□□□ -0.37
GTF3C1-211ENST00000569653 IQANK1A0A1B0GTG1 560 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 GALNSP34059 522 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 TRPC1P48995 793 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 CDH13P55290 713 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 KCNJ2P63252 427 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 TBL3Q12788 808 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 SNTB1Q13884 538 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 TSNAXIP1Q2TAA8 658 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 SGO1Q5FBB7 561 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 LGSNQ5TDP6 509 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 FAM180BQ6P0A1 224 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 FAM111BQ6SJ93 734 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 B3GNT6Q6ZMB0 384 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 SLC29A4Q7RTT9 530 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 COMMD6Q7Z4G1 85 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 CDH24Q86UP0 819 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 METTL4Q8N3J2 472 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 NAXEQ8NCW5 288 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 ZNF483Q8TF39 744 aaPredicted RBP12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 REPS1Q96D71 796 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 MTBPQ96DY7 904 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 ART5Q96L15 291 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 SERPINI1Q99574 410 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 PELOQ9BRX2 385 aaKnown RBP12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 KCNJ16Q9NPI9 418 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 ZFHX3Q15911 3703 aa12.7□□□□□ -0.38
GTF3C1-211ENST00000569653 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 FIGNL2A6NMB9 653 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 A8MT66 165 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 TRIM49D1C9J1S8 452 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 HCN1O60741 890 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 PDYNP01213 254 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 SNRPAP09012 282 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 HOXD4P09016 255 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 CHN1P15882 459 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 GPX3P22352 226 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 CCNG1P51959 295 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 PHEXP78562 749 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 CRYZQ08257 329 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 BIKQ13323 160 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 NNATQ16517 81 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 GGTA1PQ4G0N0 100 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 DCST1Q5T197 706 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 ACAD11Q709F0 780 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 GALNT12Q8IXK2 581 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 ULK2Q8IYT8 1036 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 SPPL2AQ8TCT8 520 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 CHTF18Q8WVB6 975 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 JSRP1Q96MG2 331 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 TXLNGYQ9BZA5 131 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 NXF5Q9H1B4 397 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 OR10A5Q9H207 317 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 LDAHQ9H6V9 325 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 RRAGDQ9NQL2 400 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 CNIH4Q9P003 139 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 FETUBQ9UGM5 382 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 ACAD8Q9UKU7 415 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 L3MBTL1Q9Y468 752 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 ABCA4P78363 2273 aa12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
GTF3C1-211ENST00000569653 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ACANP16112 2415 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 C2orf92A0A1B0GVN3 265 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 OR6C76A6NM76 312 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 WDR1O75083 606 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 NME6O75414 186 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 RBP1P09455 135 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 COL6A2P12110 1019 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 CPMP14384 443 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 PIK3R1P27986 724 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 SERPINB3P29508 390 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ARL1P40616 181 aaPredicted RBP12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 PTGDSP41222 190 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 XKP51811 444 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 EXOSC7Q15024 291 aaKnown RBP12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 RPS6KA2Q15349 733 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 LTB4RQ15722 352 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 OR10Q1Q8NGQ4 319 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 ATP6V1E2Q96A05 226 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 TP53INP1Q96A56 240 aa12.68□□□□□ -0.38
GTF3C1-211ENST00000569653 SARAFQ96BY9 339 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms