RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 EXOSC8Q96B26 276 aaKnown RBP12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ZBTB9Q96C00 473 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 FRMD6Q96NE9 622 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 WWTR1Q9GZV5 400 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 LRTM1Q9HBL6 345 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 MYNNQ9NPC7 610 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 PFDN4Q9NQP4 134 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 GIMAP4Q9NUV9 329 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 MAT2BQ9NZL9 334 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 ZNF639Q9UID6 485 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 CFL2Q9Y281 166 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 PTGDR2Q9Y5Y4 395 aa12.78□□□□□ -0.36
HERPUD1-218ENST00000569569 USP9XQ93008 2570 aaPredicted RBP12.77□□□□□ -0.36
HERPUD1-218ENST00000569569 LRRK2Q5S007 2527 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 TMEM233B4DJY2 109 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 PEX1O43933 1283 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 NADKO95544 446 aaPredicted RBP12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 DHRS4L1P0CG22 281 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 ARRB2P32121 409 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 MEOX1P50221 254 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 SRSF11Q05519 484 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 DUSP2Q05923 314 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 CEBPEQ15744 281 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 KRTCAP3Q53RY4 240 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 FAM71E1Q6IPT2 247 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 GFRALQ6UXV0 394 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 RTL4Q6ZR62 310 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 DDIASQ8IXT1 998 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 DND1Q8IYX4 353 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 TAGAPQ8N103 731 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 ADCY4Q8NFM4 1077 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 OR2T11Q8NH01 316 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 CDC26Q8NHZ8 85 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 PKNOX2Q96KN3 472 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 SLC35C2Q9NQQ7 365 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 SEC14L3Q9UDX4 400 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 ZDHHC2Q9UIJ5 367 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 ENTPD4Q9Y227 616 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 TMED5Q9Y3A6 229 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 PCNX1Q96RV3 2341 aa12.77□□□□□ -0.37
HERPUD1-218ENST00000569569 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 TMEM114B3SHH9 223 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 LSM1O15116 133 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 BCAS2O75934 225 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 AGFG2O95081 481 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 HSPA4LO95757 839 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 SERPINE1P05121 402 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 MPIP34949 423 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 NR0B1P51843 470 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 MPP2Q14168 576 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 CHI3L2Q15782 390 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF791Q3KP31 576 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 RFTN2Q52LD8 501 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 TRMT12Q53H54 448 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 TICAM1Q8IUC6 712 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF441Q8N8Z8 693 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 C17orf47Q8NEP4 570 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 C16orf52Q8NHV5 167 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 AGR3Q8TD06 166 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF675Q8TD23 568 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 ADIPOR1Q96A54 375 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 SPACA9Q96E40 222 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 MS4A3Q96HJ5 214 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 FCRL1Q96LA6 429 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 CCT7Q99832 543 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 MIEF1Q9NQG6 463 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 TAS2R7Q9NYW3 318 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 BCAP29Q9UHQ4 241 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 METRNQ9UJH8 293 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 OSGIN2Q9Y236 505 aa12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 SPTBN1Q01082 2364 aaKnown RBP12.76□□□□□ -0.37
HERPUD1-218ENST00000569569 CAPN14A8MX76 684 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 NPIPA5E9PKD4 350 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 NCKAP5O14513 1909 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SEMA7AO75326 666 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SNUPNO95149 360 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 UNC5CO95185 931 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 P04436 131 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 FBXO45P0C2W1 286 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 ZNF24P17028 368 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 CNR1P21554 472 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 GRK2P25098 689 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 TACR1P25103 407 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 PTGER1P34995 402 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 SOX18P35713 384 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 KCNK10P57789 538 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 GPR85P60893 370 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 ABCE1P61221 599 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 MRPS35P82673 323 aaKnown RBP12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 RBPJQ06330 500 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 CASP8Q14790 479 aa12.75□□□□□ -0.37
HERPUD1-218ENST00000569569 EXOSC7Q15024 291 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms