RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TMEM81Q6P7N7 255 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 CCDC137Q6PK04 289 aaKnown RBP11.34□□□□□ -0.59
SNX29-207ENST00000568949 YRDCQ86U90 279 aaKnown RBP11.34□□□□□ -0.59
SNX29-207ENST00000568949 IGDCC3Q8IVU1 814 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 OR1J4Q8NGS1 313 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 DOK4Q8TEW6 326 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 ANKRD49Q8WVL7 239 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 PLAC1Q9HBJ0 212 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 CLCF1Q9UBD9 225 aa11.34□□□□□ -0.59
SNX29-207ENST00000568949 FAM95CA0A1B0GW59 222 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 A0A1W2PNV4 684 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 NCF1BA6NI72 391 aaPredicted RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 NCF1CA8MVU1 366 aaPredicted RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 BANF1O75531 89 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 TGFB1P01137 390 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 IFNA2P01563 188 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 CRHP06850 196 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 C8BP07358 591 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 RHOXF2BP0C7M4 288 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 NCF1P14598 390 aaPredicted RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 NAGAP17050 411 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 CPOXP36551 454 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 CD79BP40259 229 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 BUD31P41223 144 aaPredicted RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 HSPA7P48741 367 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 NRG3P56975 720 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 IRF8Q02556 426 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 KRTAP1-1Q07627 177 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 FAM27E3Q08E93 113 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 CHIT1Q13231 466 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 ZNF460Q14592 562 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 SETDB1Q15047 1291 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 MSS51Q4VC12 460 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 DEPDC1Q5TB30 811 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 C18orf63Q68DL7 685 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 SULT1C3Q6IMI6 304 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 HEPHL1Q6MZM0 1159 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 HMBOX1Q6NT76 420 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 PODNL1Q6PEZ8 512 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 TRMT10BQ6PF06 316 aaKnown RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 ANGPTL8Q6UXH0 198 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 ZC3HC1Q86WB0 502 aaKnown RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 PHC2Q8IXK0 858 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 LAS2Q8IYD9 372 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 GCNT2Q8N0V5 402 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 ZCCHC7Q8N3Z6 543 aaKnown RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 C17orf47Q8NEP4 570 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 IGFBPL1Q8WX77 278 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 ADIPOR1Q96A54 375 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 CMTM7Q96FZ5 175 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 MARK4Q96L34 752 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 MED18Q9BUE0 208 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 G6PC3Q9BUM1 346 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 OR2B2Q9GZK3 357 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 DERL2Q9GZP9 239 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 POPDC3Q9HBV1 291 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 ZNF701Q9NV72 531 aaPredicted RBP11.33□□□□□ -0.6
SNX29-207ENST00000568949 KLHL28Q9NXS3 571 aa11.33□□□□□ -0.6
SNX29-207ENST00000568949 SNPHO15079 494 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ZSCAN12O43309 604 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ABCB1P08183 1280 aaPredicted RBP11.32□□□□□ -0.6
SNX29-207ENST00000568949 SLC35E2BP0CK96 405 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 SLC35E2P0CK97 266 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 KRT15P19012 456 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 EPORP19235 508 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ARFIP1P53367 373 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
SNX29-207ENST00000568949 SRYQ05066 204 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 DMTNQ08495 405 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 FUT7Q11130 342 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 SNTA1Q13424 505 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 FRG1Q14331 258 aaKnown RBP11.32□□□□□ -0.6
SNX29-207ENST00000568949 SLC30A6Q6NXT4 461 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 PLEKHM3Q6ZWE6 761 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 GPSM1Q86YR5 675 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 GRAMD2AQ8IUY3 354 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 MEIOBQ8N635 442 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 TRIM58Q8NG06 486 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 GRK7Q8WTQ7 553 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ESAMQ96AP7 390 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 RGMAQ96B86 450 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 CTHRC1Q96CG8 243 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 CENPKQ9BS16 269 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 SORBS1Q9BX66 1292 aaKnown RBP11.32□□□□□ -0.6
SNX29-207ENST00000568949 METTL7AQ9H8H3 244 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 CXorf21Q9HAI6 301 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 PRM3Q9NNZ6 103 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ELOVL5Q9NYP7 299 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 ADGRE2Q9UHX3 823 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 DLGAP4Q9Y2H0 992 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 PSAT1Q9Y617 370 aa11.32□□□□□ -0.6
SNX29-207ENST00000568949 SAP18O00422 153 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 HCRTR2O43614 444 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 SH3BGRLO75368 114 aa11.31□□□□□ -0.6
SNX29-207ENST00000568949 PRKRAO75569 313 aaKnown RBP11.31□□□□□ -0.6
SNX29-207ENST00000568949 CBR3O75828 277 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms