RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 C1orf50Q9BV19 199 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 MRPL1Q9BYD6 325 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 RPF2Q9H7B2 306 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 EFCAB1Q9HAE3 211 aa12.52□□□□□ -0.41
CLK3-218ENST00000566926 PPIEQ9UNP9 301 aaKnown RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 POLR3HQ9Y535 204 aaPredicted RBP12.52□□□□□ -0.41
CLK3-218ENST00000566926 A0A0A6YYD5 115 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 ANGPT2O15123 496 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 PROM1O43490 865 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 DNAJC8O75937 253 aaPredicted RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 FAM58BPP0C7Q3 252 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 G6PDP11413 515 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 BCKDHAP12694 445 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 TIA1P31483 386 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLK3-218ENST00000566926 BSGP35613 385 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 CLDN8P56748 225 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 TNFRSF17Q02223 184 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 TBL3Q12788 808 aaKnown RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 AGKQ53H12 422 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 FCRLBQ6BAA4 426 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 MRM1Q6IN84 353 aaKnown RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 BLOC1S3Q6QNY0 202 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 FAM180AQ6UWF9 173 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 IKBIPQ70UQ0 350 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 SNX32Q86XE0 403 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 BEST3Q8N1M1 668 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 ARHGAP24Q8N264 748 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 METTL4Q8N3J2 472 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 PCYOX1LQ8NBM8 494 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 MORN4Q8NDC4 146 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 KLHL29Q96CT2 875 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 APIPQ96GX9 242 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 MARK4Q96L34 752 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 PELOQ9BRX2 385 aaKnown RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 SORBS1Q9BX66 1292 aaKnown RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 DPY30Q9C005 99 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 MMADHCQ9H3L0 296 aaPredicted RBP12.51□□□□□ -0.41
CLK3-218ENST00000566926 ASF1BQ9NVP2 202 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 CCDC167Q9P0B6 97 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 MCM8Q9UJA3 840 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 NDUFAF1Q9Y375 327 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 PCDHGB6Q9Y5F9 930 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
CLK3-218ENST00000566926 GABRR3A8MPY1 467 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ANKRD28O15084 1053 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 PRAMEF2O60811 474 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 LDB3O75112 727 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 EEDO75530 441 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 ZFAND5O76080 213 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ETHE1O95571 254 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 NPPAP01160 153 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 IL6P05231 212 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 KRT16P08779 473 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 NR2F6P10588 404 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 CD46P15529 392 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 POLR2JP52435 117 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 NCALDP61601 193 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 LRRC74AQ0VAA2 488 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ELOAQ14241 798 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 MMEL1Q495T6 779 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 PRR30Q53SZ7 412 aaPredicted RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 PAOXQ6QHF9 649 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 HACD2Q6Y1H2 254 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 MSANTD1Q6ZTZ1 278 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ARMC10Q8N2F6 343 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 LIX1Q8N485 282 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 KIF2BQ8N4N8 673 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 C1orf52Q8N6N3 182 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 BCORP1Q8N888 145 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 APCDD1LQ8NCL9 501 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 DNAJB8Q8NHS0 232 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 NCLNQ969V3 563 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 TESCQ96BS2 214 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ROPN1LQ96C74 230 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 RBM18Q96H35 190 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 ART5Q96L15 291 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 DGAT2Q96PD7 388 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 RAB3IPQ96QF0 476 aaPredicted RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 PRPF18Q99633 342 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 BARD1Q99728 777 aaKnown RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 BTBD10Q9BSF8 475 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ZNF717Q9BY31 904 aaPredicted RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 GIMAP2Q9UG22 337 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ATG4BQ9Y4P1 393 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 ASB4Q9Y574 426 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 HIVEP3Q5T1R4 2406 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
CLK3-218ENST00000566926 TENM4Q6N022 2769 aa12.5□□□□□ -0.41
CLK3-218ENST00000566926 TRBV11-1A0A0K0K1C0 115 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 LOC100653049A0A140TA62 436 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 A0A1W2PP18 115 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 B2RBV5 119 aa12.49□□□□□ -0.41
CLK3-218ENST00000566926 C17orf105B2RV13 164 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms