RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 ZZZ3Q8IYH5 903 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 PRSS58Q8IYP2 241 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 OR2L13Q8N349 312 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 C7orf57Q8NEG2 295 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 NUP43Q8NFH3 380 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 STT3BQ8TCJ2 826 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 JADE3Q92613 823 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 LRGUKQ96M69 825 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 ASPSCR1Q9BZE9 553 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 MAT2BQ9NZL9 334 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 NTMQ9P121 344 aa17.55■□□□□ 0.4
COMMD4-213ENST00000565834 CNOT1A5YKK6 2376 aaKnown RBP17.54■□□□□ 0.4
COMMD4-213ENST00000565834 A0A087WV62 115 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 IGKV3D-11A0A0A0MRZ8 115 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 UPK1AO00322 258 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 TNFRSF21O75509 655 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 IFNA16P05015 189 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 IFI6P09912 130 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 NCK1P16333 377 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 GGT1P19440 569 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 RHAGQ02094 409 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 GCNT6Q5T4J0 391 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 LCN8Q6JVE9 175 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 TNFAIP8L2Q6P589 184 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-213ENST00000565834 FAM111BQ6SJ93 734 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 CYP2R1Q6VVX0 501 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 PROSER1Q86XN7 944 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 PTOV1Q86YD1 416 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 GALNT12Q8IXK2 581 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 WDR36Q8NI36 951 aaKnown RBP17.54■□□□□ 0.4
COMMD4-213ENST00000565834 RIT1Q92963 219 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 STMN2Q93045 179 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 FKBP10Q96AY3 582 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 DDA1Q9BW61 102 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 ANKRA2Q9H9E1 313 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 CXorf21Q9HAI6 301 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 MKL2Q9ULH7 1088 aa17.54■□□□□ 0.4
COMMD4-213ENST00000565834 FAF1Q9UNN5 650 aaPredicted RBP17.54■□□□□ 0.4
COMMD4-213ENST00000565834 PMS2P1A4D2B8 440 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 MGRN1O60291 552 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 PLOD3O60568 738 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 HMGN2P05204 90 aaKnown RBP17.53■□□□□ 0.4
COMMD4-213ENST00000565834 NUDT7P0C024 238 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 ZGLP1P0C6A0 271 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 ATP6V1B2P21281 511 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 MAGEA8P43361 318 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 PRIM2P49643 509 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 ANXA11P50995 505 aaKnown RBP17.53■□□□□ 0.4
COMMD4-213ENST00000565834 DSTNP60981 165 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 MGAT2Q10469 447 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 ADRM1Q16186 407 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 VMACQ2NL98 169 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 TRMT12Q53H54 448 aaKnown RBP17.53■□□□□ 0.4
COMMD4-213ENST00000565834 GLYATQ6IB77 296 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 DGAT2L6Q6ZPD8 337 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 VWA5B2Q8N398 1253 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 HORMAD2Q8N7B1 307 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 DOK4Q8TEW6 326 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 FIG4Q92562 907 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 TSLPQ969D9 159 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 MS4A4EQ96PG1 132 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 VN1R1Q9GZP7 353 aa17.53■□□□□ 0.4
COMMD4-213ENST00000565834 C19orf53Q9UNZ5 99 aaPredicted RBP17.53■□□□□ 0.4
COMMD4-213ENST00000565834 TM4SF5O14894 197 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 ALBP02768 609 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 CT62P0C5K7 136 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 BMP2P12643 396 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 CEACAM1P13688 526 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 MATN1P21941 496 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 GALNSP34059 522 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SOX18P35713 384 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 KHKP50053 298 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 MAP4K2Q12851 820 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 MAP7Q14244 749 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.4
COMMD4-213ENST00000565834 C3orf38Q5JPI3 329 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 FHL5Q5TD97 284 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 LAPTM4BQ86VI4 370 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SPATA24Q86W54 205 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 C11orf65Q8NCR3 313 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SLC26A7Q8TE54 656 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 MR1Q95460 341 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 NCLNQ969V3 563 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 CTHRC1Q96CG8 243 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SLC26A1Q9H2B4 701 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SERHL2Q9H4I8 314 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 EQTNQ9NQ60 294 aa17.52■□□□□ 0.4
COMMD4-213ENST00000565834 PTPRZ1P23471 2315 aaPredicted RBP17.52■□□□□ 0.4
COMMD4-213ENST00000565834 SYNDIG1LA6NDD5 238 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 CXCR6O00574 342 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 RECKO95980 971 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 NOVA1P51513 510 aaKnown RBP17.52■□□□□ 0.39
COMMD4-213ENST00000565834 RBBP4Q09028 425 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 RIPK1Q13546 671 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 NSDHLQ15738 373 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 NKG7Q16617 165 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 MLIPQ5VWP3 458 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 LCN10Q6JVE6 187 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 SHISA6Q6ZSJ9 500 aa17.52■□□□□ 0.39
COMMD4-213ENST00000565834 SPPL2CQ8IUH8 684 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms