RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 B4GALT7Q9UBV7 327 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF629Q9UEG4 869 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 CES1P1Q9UKY3 287 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ANGPTL3Q9Y5C1 460 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 TNPO3Q9Y5L0 923 aaKnown RBP7.86□□□□□ -1.15
CAPN3-213ENST00000565173 NPFFR2Q9Y5X5 522 aa7.86□□□□□ -1.15
CAPN3-213ENST00000565173 ANKHD1Q8IWZ3 2542 aaKnown RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 KIAA1549Q9HCM3 1950 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 A0A1B0GTL3 188 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 CAPN14A8MX76 684 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 SNX4O95219 450 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 CLDN9O95484 217 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 KLK1P06870 262 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 GDF1P27539 372 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 CASP3P42574 277 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 CDK9P50750 372 aaKnown RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 XKP51811 444 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF136P52737 540 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 KRTAP21-3Q3LHN1 58 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 FBXL19-AS1Q494R0 122 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 TECRLQ5HYJ1 363 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NHSL2Q5HYW2 709 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM198Q66K66 360 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 VASNQ6EMK4 673 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 DESI1Q6ICB0 168 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 OR52E8Q6IFG1 317 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 SYT10Q6XYQ8 523 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NUDT13Q86X67 352 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 LIX1Q8N485 282 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 SIMC1Q8NDZ2 872 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 C17orf47Q8NEP4 570 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NINJ1Q92982 152 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF597Q96LX8 424 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 C16orf45Q96MC5 204 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 RILPQ96NA2 401 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NSUN5Q96P11 429 aaKnown RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 SERPINI1Q99574 410 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NTMT1Q9BV86 223 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 PRDM14Q9GZV8 571 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 RAB17Q9H0T7 212 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 NOL11Q9H8H0 719 aaKnown RBP7.85□□□□□ -1.15
CAPN3-213ENST00000565173 ZBTB26Q9HCK0 441 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 ZNF639Q9UID6 485 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 ST6GALNAC2Q9UJ37 374 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 DTX4Q9Y2E6 619 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 C15orf41Q9Y2V0 281 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 SLC6A5Q9Y345 797 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 FREM3P0C091 2139 aa7.85□□□□□ -1.15
CAPN3-213ENST00000565173 AKAP6Q13023 2319 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 C15orf38-AP3S2A0A0A6YYH1 394 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ESYT3A0FGR9 886 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 A6NNC1 897 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PPP6CO00743 305 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TP53I11O14683 189 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TRAPPC6AO75865 159 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ABCB1P08183 1280 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 CPMP14384 443 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 BMP7P18075 431 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 BMP5P22003 454 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PIK3R1P27986 724 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ABCD3P28288 659 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PTPN6P29350 595 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TYK2P29597 1187 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 UQCRC1P31930 480 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PTGDSP41222 190 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 MAGEA12P43365 314 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 ASCL1P50553 236 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 NAGLUP54802 743 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PHEXP78562 749 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 SLC7A5Q01650 507 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 DUSP2Q05923 314 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 GALNT1Q10472 559 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 MAP4K2Q12851 820 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TRAF3Q13114 568 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 DAZAP2Q15038 168 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PRICKLE4Q2TBC4 344 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 EIPR1Q53HC9 387 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 DCST1Q5T197 706 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FAM219BQ5XKK7 198 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 NSUN5P2Q63ZY6 315 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FRG2Q64ET8 278 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TIGD3Q6B0B8 471 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 KLC3Q6P597 504 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM81Q6P7N7 255 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 RPS27LQ71UM5 84 aaKnown RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PACS2Q86VP3 889 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 CDC20BQ86Y33 519 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 LACC1Q8IV20 430 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PRR22Q8IZ63 422 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 MMP21Q8N119 569 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 METTL4Q8N3J2 472 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TMEM151AQ8N4L1 468 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 PTGR2Q8N8N7 351 aaPredicted RBP7.84□□□□□ -1.15
CAPN3-213ENST00000565173 OR7G1Q8NGA0 311 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 OR4K14Q8NGD5 310 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 TRPC4APQ8TEL6 797 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 FAM222BQ8WU58 562 aa7.84□□□□□ -1.15
CAPN3-213ENST00000565173 RNASE6Q93091 150 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms