RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 FAM180BQ6P0A1 224 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 ZNF585AQ6P3V2 769 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 GPRIN3Q6ZVF9 776 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 DND1Q8IYX4 353 aaKnown RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 LRRC25Q8N386 305 aaPredicted RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 C1orf52Q8N6N3 182 aaKnown RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 CDYL2Q8N8U2 506 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 SIMC1Q8NDZ2 872 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 RND1Q92730 232 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 TP53INP1Q96A56 240 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 TM4SF18Q96CE8 201 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 JSRP1Q96MG2 331 aaPredicted RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 ZNF382Q96SR6 550 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 ACPTQ9BZG2 426 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 UCK2Q9BZX2 261 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 ENKD1Q9H0I2 346 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 SLC6A15Q9H2J7 730 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 ZFP64Q9NPA5 681 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 NPDC1Q9NQX5 325 aaPredicted RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 CNIH4Q9P003 139 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 SPRR3Q9UBC9 169 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 BOKQ9UMX3 212 aaPredicted RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 DTX4Q9Y2E6 619 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 PCDHA9Q9Y5H5 950 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 FAM215AQ9Y5M1 114 aa9.22□□□□□ -0.93
CMTM3-209ENST00000565003 PHF3Q92576 2039 aaKnown RBP9.22□□□□□ -0.93
CMTM3-209ENST00000565003 CSMD2Q7Z408 3487 aa9.21□□□□□ -0.93
CMTM3-209ENST00000565003 EXPH5Q8NEV8 1989 aa9.21□□□□□ -0.93
CMTM3-209ENST00000565003 NINQ8N4C6 2090 aa9.21□□□□□ -0.93
CMTM3-209ENST00000565003 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 FOXO6A8MYZ6 492 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 BCKDKO14874 412 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 SUSD5O60279 629 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 GUCY1B2O75343 617 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TRIM3O75382 744 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ERAL1O75616 437 aaKnown RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TOXO94900 526 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ATP1B1P05026 303 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 PYGBP11216 843 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 IMPDH1P20839 514 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 GPX3P22352 226 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ATP5F1P24539 256 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ACVR2AP27037 513 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 CHRNB4P30926 498 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 MAN2A2P49641 1150 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 PRKAA2P54646 552 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TFF3Q07654 80 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 DUSP8Q13202 625 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 SLC10A1Q14973 349 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 EXOSC7Q15024 291 aaKnown RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 RPS6KA2Q15349 733 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 LTB4RQ15722 352 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 NNATQ16517 81 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 PRICKLE4Q2TBC4 344 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 C6orf163Q5TEZ5 329 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 HLA-DQA1Q5Y7H0 255 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 RTL6Q6ICC9 239 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 FAM111BQ6SJ93 734 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 CCDC71Q8IV32 467 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 PRR22Q8IZ63 422 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TAGAPQ8N103 731 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 VWA5B2Q8N398 1253 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ADCY4Q8NFM4 1077 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 OR7G1Q8NGA0 311 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 SPPL2AQ8TCT8 520 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 CHTF18Q8WVB6 975 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 ASB5Q8WWX0 329 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 DIO2Q92813 273 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 KLHL29Q96CT2 875 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 CNRIP1Q96F85 164 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 LURAP1Q96LR2 239 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 KCNA7Q96RP8 456 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 SPOCK3Q9BQ16 436 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TREX2Q9BQ50 279 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TTYH2Q9BSA4 534 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 DOHHQ9BU89 302 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 NXF5Q9H1B4 397 aaKnown RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 LDAHQ9H6V9 325 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 EXO5Q9H790 373 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 RYDENQ9NUL5 291 aaKnown RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 MAT2BQ9NZL9 334 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 PSMC3IPQ9P2W1 217 aaPredicted RBP9.21□□□□□ -0.94
CMTM3-209ENST00000565003 HEY2Q9UBP5 337 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 VPS29Q9UBQ0 182 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 FETUBQ9UGM5 382 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 TBK1Q9UHD2 729 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 EMCNQ9ULC0 261 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 NPFFR2Q9Y5X5 522 aa9.21□□□□□ -0.94
CMTM3-209ENST00000565003 A0A1W2PPM1 405 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 ANKRD33BA6NCL7 494 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 GOLGA6L10A6NI86 522 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 TP53I11O14683 189 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 HCN1O60741 890 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 CBX7O95931 251 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 KRT6AP02538 564 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 KRT6BP04259 564 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 GLI4P10075 376 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 HSD3B1P14060 373 aa9.2□□□□□ -0.94
CMTM3-209ENST00000565003 IGFBP2P18065 325 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms