RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 ASB8Q9H765 288 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 MBD1Q9UIS9 605 aaPredicted RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 MAP4K5Q9Y4K4 846 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 PIPSLA2A3N6 862 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 FFAR1O14842 300 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 CLDN7O95471 211 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ELK1P19419 428 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 GBX2P52951 348 aaPredicted RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 WDR5P61964 334 aaKnown RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ARF5P84085 180 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ATRAIDQ6UW56 229 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 TMEM107Q6UX40 140 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SPRED2Q7Z698 418 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SLC30A8Q8IWU4 369 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 PROKR2Q8NFJ6 384 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 OR52I1Q8NGK6 324 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SMAD5Q99717 465 aaKnown RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 DUSP26Q9BV47 211 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SLC22A14Q9Y267 594 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 A0A1W2PRU2 124 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 NRG2O14511 850 aaPredicted RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 SMAD6O43541 496 aaKnown RBP15.43■□□□□ 0.06
LINC00554-201ENST00000564841 MTX2O75431 263 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 TRBC1P01850 177 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 IFNA16P05015 189 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 EPHB3P54753 998 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 ERVK-21P61565 698 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 RING1Q06587 406 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 HUS1BQ8NHY5 278 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 CLEC4AQ9UMR7 237 aa15.43■□□□□ 0.06
LINC00554-201ENST00000564841 PATJQ8NI35 1801 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CD8B2A6NJW9 211 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 NDUFA2O43678 99 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CD8BP10966 210 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 SLC6A1P30531 599 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 BMP8BP34820 402 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 YBEYP58557 167 aaPredicted RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 RAB14P61106 215 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CRB2Q5IJ48 1285 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ADGRF1Q5T601 910 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 METTL2BQ6P1Q9 378 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 C17orf107Q6ZR85 190 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 FAM92BQ6ZTR7 304 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 BMP8AQ7Z5Y6 402 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 RBM45Q8IUH3 476 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 PIAS4Q8N2W9 510 aaPredicted RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 LMNTD1Q8N9Z9 388 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 GPR156Q8NFN8 814 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 MYO19Q96H55 970 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 HHIPQ96QV1 700 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 MAPKAP1Q9BPZ7 522 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 WFDC6Q9BQY6 131 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 GHITMQ9H3K2 345 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 IFT46Q9NQC8 304 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CUEDC1Q9NWM3 386 aaPredicted RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 EXTL2Q9UBQ6 330 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 MRPS7Q9Y2R9 242 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 HRH3Q9Y5N1 445 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 INSL5Q9Y5Q6 135 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 KHNYNO15037 678 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 PLATP00750 562 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 IFNA7P01567 189 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 OR12D1P0DN82 309 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 PRPS1L1P21108 318 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 STOMP27105 288 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ARHGDIBP52566 201 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 LIM2P55344 173 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ERVFC1P60507 584 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 RHOAP61586 193 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 PPP3R1P63098 170 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CAMK2DQ13557 499 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 NCF4Q15080 339 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ATP13A5Q4VNC0 1218 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ZNF697Q5TEC3 545 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 RAET1GQ6H3X3 334 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 TSPAN33Q86UF1 283 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 LHFPL3Q86UP9 236 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 OR8D4Q8NGM9 314 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 TMEM163Q8TC26 289 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 POP5Q969H6 163 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 CREB3L1Q96BA8 519 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 PIP5K1AQ99755 562 aa15.42■□□□□ 0.06
LINC00554-201ENST00000564841 ZMAT5Q9UDW3 170 aaKnown RBP15.42■□□□□ 0.06
LINC00554-201ENST00000564841 C1orf226A1L170 272 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 H3BNC9 293 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 EEF1E1O43324 174 aaKnown RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RECKO95980 971 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 DNASE1P24855 282 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RPIAP49247 311 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 LRRC74AQ0VAA2 488 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 PLA1AQ53H76 456 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 USP45Q70EL2 814 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 KIAA1143Q96AT1 154 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 CMTM7Q96FZ5 175 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 GSX2Q9BZM3 304 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 RANBP3Q9H6Z4 567 aaPredicted RBP15.41■□□□□ 0.06
LINC00554-201ENST00000564841 FZD3Q9NPG1 666 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 SDHAF2Q9NX18 166 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 NLGN3Q9NZ94 848 aa15.41■□□□□ 0.06
LINC00554-201ENST00000564841 REV1Q9UBZ9 1251 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms