RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 IRAK4Q9NWZ3 460 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 VPS29Q9UBQ0 182 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 EDARQ9UNE0 448 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 SLC12A4Q9UP95 1085 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 DLGAP4Q9Y2H0 992 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 NEUROG3Q9Y4Z2 214 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 SLC22A7Q9Y694 548 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 ATP23Q9Y6H3 246 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 USH1CQ9Y6N9 552 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 LAMA5O15230 3695 aa4.9□□□□□ -1.63
HERPUD1-207ENST00000563781 KNTC1P50748 2209 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 AHCTF1Q8WYP5 2266 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 A0A0A6YYD5 115 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 A0A1B0GX78 115 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ATP6AP2A0A1C7CYW4 349 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 URADA6NGE7 173 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SLCO1B7G3V0H7 640 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SGK494L7N484 410 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SCDO00767 359 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RGS14O43566 566 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SHOX2O60902 331 aaPredicted RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CNOT3O75175 753 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 PEX11AO75192 247 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RDH16O75452 317 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ATP6AP2O75787 350 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RSL1D1O76021 490 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TGDSO95455 350 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CHEK2O96017 543 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 GBAP04062 536 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 VIMP08670 466 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 HBQ1P09105 142 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CLEC2LP0C7M8 214 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 MED14OSP0DP75 135 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 HIST1H1TP22492 207 aaPredicted RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 EPHA3P29320 983 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SLC5A2P31639 672 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SSR2P43308 183 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TSFMP43897 325 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 OR1D4P47884 311 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 MAP2K6P52564 334 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 EFNA3P52797 238 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ARFIP1P53367 373 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SEC24CP53992 1094 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ARSFP54793 590 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 OLR1P78380 273 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 BTN3A2P78410 334 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SHC2P98077 582 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 MAT1AQ00266 395 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RUNX2Q13950 521 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 HERC3Q15034 1050 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 NDUFA9Q16795 377 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 IMPG1Q17R60 797 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SYT16Q17RD7 645 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 FAM214AQ32MH5 1076 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 C3orf36Q3SXR2 165 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 NKAIN1Q4KMZ8 207 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 DEFB134Q4QY38 66 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 C6orf136Q5SQH8 315 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 C1orf189Q5VU69 101 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 OR4C11Q6IEV9 310 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 PRMT9Q6P2P2 845 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TRIM40Q6P9F5 258 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 EPGNQ6UW88 154 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 FAM198BQ6UWH4 519 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ZNF517Q6ZMY9 492 aaPredicted RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TTLL10Q6ZVT0 673 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 LARP4Q71RC2 724 aaKnown RBP eCLIP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ABHD13Q7L211 337 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TMEM126BQ8IUX1 230 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 DDIASQ8IXT1 998 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 DSELQ8IZU8 1212 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CA13Q8N1Q1 262 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ZCCHC7Q8N3Z6 543 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 C1orf52Q8N6N3 182 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ACOT4Q8N9L9 421 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 OR5T3Q8NGG3 340 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 PROKR1Q8TCW9 393 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ADAMTS18Q8TE60 1221 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 STON2Q8WXE9 905 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RGMAQ96B86 450 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 NXPE2Q96DL1 559 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 THOC1Q96FV9 657 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CHMP6Q96FZ7 201 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 RSRC1Q96IZ7 334 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 SLC45A3Q96JT2 553 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 PPP1R36Q96LQ0 422 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 KCNC2Q96PR1 638 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 OR52B2Q96RD2 323 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 CCT7Q99832 543 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TBCDQ9BTW9 1192 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 ULBP3Q9BZM4 244 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 DDX31Q9H8H2 851 aaKnown RBP4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 KCNK13Q9HB14 408 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 LRTM1Q9HBL6 345 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 TXLNGQ9NUQ3 528 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 C1orf109Q9NX04 203 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 KCMF1Q9P0J7 381 aa4.89□□□□□ -1.63
HERPUD1-207ENST00000563781 HCN3Q9P1Z3 774 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms