RNA–Protein interactions for RNA: ENST00000563643.1

E4F1-203, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-203ENST00000563643 NEIL3Q8TAT5 605 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 UTP15Q8TED0 518 aaKnown RBP16.59■□□□□ 0.25
E4F1-203ENST00000563643 UBE2E3Q969T4 207 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 NCLNQ969V3 563 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 RASL10BQ96S79 203 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 SLC6A15Q9H2J7 730 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 RHBGQ9H310 441 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 ZNF703Q9H7S9 590 aaPredicted RBP16.59■□□□□ 0.25
E4F1-203ENST00000563643 PRDM9Q9NQV7 894 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 SACM1LQ9NTJ5 587 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 TMEM216Q9P0N5 145 aa16.59■□□□□ 0.25
E4F1-203ENST00000563643 ZNF490Q9ULM2 529 aaPredicted RBP16.59■□□□□ 0.25
E4F1-203ENST00000563643 A0A1W2PPM1 405 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 ANKDD1BA6NHY2 528 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 RNF223E7ERA6 249 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 SIAH2O43255 324 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 UGDHO60701 494 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 ZFAND5O76080 213 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 ZNF888P0CJ79 500 aaPredicted RBP16.58■□□□□ 0.24
E4F1-203ENST00000563643 SMIM10L1P0DMW3 83 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 CTSSP25774 331 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 HPDP32754 393 aaPredicted RBP16.58■□□□□ 0.24
E4F1-203ENST00000563643 OPRM1P35372 400 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 STXBP1P61764 594 aaKnown RBP16.58■□□□□ 0.24
E4F1-203ENST00000563643 GTF2H2Q13888 395 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 DEFB134Q4QY38 66 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 GRHL2Q6ISB3 625 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 GTF2H2CQ6P1K8 395 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 SH2D5Q6ZV89 423 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 GOLGA7Q7Z5G4 137 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 VN1R5Q7Z5H4 357 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 MREGQ8N565 214 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 GOLM1Q8NBJ4 401 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 PHF21BQ96EK2 531 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 SMIM10Q96HG1 83 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 AMBRA1Q9C0C7 1298 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 CLK4Q9HAZ1 481 aaKnown RBP16.58■□□□□ 0.24
E4F1-203ENST00000563643 MYOTQ9UBF9 498 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 PPIEQ9UNP9 301 aaKnown RBP16.58■□□□□ 0.24
E4F1-203ENST00000563643 ATG4BQ9Y4P1 393 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 KIAA1549Q9HCM3 1950 aa16.58■□□□□ 0.24
E4F1-203ENST00000563643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.58■□□□□ 0.243e-7■■■■□ 22.3
E4F1-203ENST00000563643 SVEP1Q4LDE5 3571 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 DEFB108AA8MXU0 73 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 WWP2O00308 870 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 CD5LO43866 347 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 CCL3P10147 92 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 KRT15P19012 456 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 SERPINB1P30740 379 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 HNF4AP41235 474 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 ADPRMQ3LIE5 342 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 TOR1AIP1Q5JTV8 583 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 LIPJQ5W064 366 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 NSUN5P2Q63ZY6 315 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 MED27Q6P2C8 311 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 LAS2Q8IYD9 372 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 RIBC1Q8N443 379 aaPredicted RBP16.57■□□□□ 0.24
E4F1-203ENST00000563643 OR2W6PQ8NHA6 318 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 CCT6BQ92526 530 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 GAL3ST3Q96A11 431 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 C1QTNF3Q9BXJ4 246 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 AICDAQ9GZX7 198 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 KLHL31Q9H511 634 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 IPPKQ9H8X2 491 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 ACTR8Q9H981 624 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 DCDC2Q9UHG0 476 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 TESMINQ9Y4I5 508 aa16.57■□□□□ 0.24
E4F1-203ENST00000563643 LRIT2A6NDA9 550 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 A8MT66 165 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 KCNAB3O43448 404 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 TBX6O95947 436 aaPredicted RBP16.56■□□□□ 0.24
E4F1-203ENST00000563643 B3GALT4O96024 378 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 P04436 131 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 RPS17P08708 135 aaKnown RBP16.56■□□□□ 0.24
E4F1-203ENST00000563643 RFPL3SP0C7P2 107 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 PAX1P15863 534 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 TAC1P20366 129 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 HNRNPH1P31943 449 aaKnown RBP16.56■□□□□ 0.24
E4F1-203ENST00000563643 GPR143P51810 404 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 ADNP2Q6IQ32 1131 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 LUZP2Q86TE4 346 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 LIX1Q8N485 282 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 OR7G3Q8NG95 312 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 SREK1Q8WXA9 508 aaKnown RBP16.56■□□□□ 0.24
E4F1-203ENST00000563643 MS4A6EQ96DS6 147 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 SGCZQ96LD1 299 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 ACKR4Q9NPB9 350 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 NDRG3Q9UGV2 375 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 PCTPQ9UKL6 214 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 TSC22D4Q9Y3Q8 395 aa16.56■□□□□ 0.24
E4F1-203ENST00000563643 C15orf38-AP3S2A0A0A6YYH1 394 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 C4orf51C9J302 202 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 CTIFO43310 598 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 ERI3O43414 337 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 GLRA3O75311 464 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 ERN1O75460 977 aaKnown RBP16.55■□□□□ 0.24
E4F1-203ENST00000563643 IL18BPO95998 194 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 CPA2P48052 419 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 TRPC1P48995 793 aa16.55■□□□□ 0.24
E4F1-203ENST00000563643 RAB8AP61006 207 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms