RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
COMMD4-205ENST00000562310 SCN2AQ99250 2005 aa13.39□□□□□ -0.27
COMMD4-205ENST00000562310 DUXAA6NLW8 204 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 HMGN4O00479 90 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 CASQ2O14958 399 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 CBFA2T3O75081 653 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 COQ9O75208 318 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 RFPL3O75679 317 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 SCRG1O75711 98 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 PDE9AO76083 593 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 HMGN2P05204 90 aaKnown RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 NBL1P41271 181 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 STT3AP46977 705 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 PTDSS1P48651 473 aaKnown RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 RPS26P62854 115 aaKnown RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ID2Q02363 134 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 LASP1Q14847 261 aaKnown RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 SYT16Q17RD7 645 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 PRICKLE4Q2TBC4 344 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 FHL5Q5TD97 284 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 PRAMEF8Q5VWM4 474 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 PRAMEF7Q5VXH5 474 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 REEP3Q6NUK4 255 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ZCCHC12Q6PEW1 402 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 GALNT12Q8IXK2 581 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 CATSPER1Q8NEC5 780 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ADCY4Q8NFM4 1077 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 OR7G2Q8NG99 324 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 NFKBIDQ8NI38 313 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 FBXO30Q8TB52 745 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 KAT2AQ92830 837 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 MAL2Q969L2 176 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 SLC47A1Q96FL8 570 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 DGAT2Q96PD7 388 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ASPSCR1Q9BZE9 553 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 OR51I1Q9H343 314 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 LANCL2Q9NS86 450 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 MAT2BQ9NZL9 334 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 TMEM184BQ9Y519 407 aaPredicted RBP13.38□□□□□ -0.27
COMMD4-205ENST00000562310 MAU2Q9Y6X3 613 aa13.38□□□□□ -0.27
COMMD4-205ENST00000562310 ASCC3Q8N3C0 2202 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 FER1L5A0AVI2 2057 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 EFCAB7A8K855 629 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 UPK1AO00322 258 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 SOX30O94993 753 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 ONECUT2O95948 504 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 FASP25445 335 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 OR1D4P47884 311 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 PRKAG1P54619 331 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 PCBP3P57721 371 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 MC2RQ01718 297 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 C16orf72Q14CZ0 275 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CRB2Q5IJ48 1285 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 ATAD3BQ5T9A4 648 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 MFSD12Q6NUT3 480 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CDC73Q6P1J9 531 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 FKBP9P1Q75LS8 142 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CBLL1Q75N03 491 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 B3GNT8Q7Z7M8 397 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 ZC3H7AQ8IWR0 971 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 VWA5B2Q8N398 1253 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 ATOH1Q92858 354 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 PPWD1Q96BP3 646 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CTHRC1Q96CG8 243 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 RBM18Q96H35 190 aaKnown RBP13.37□□□□□ -0.27
COMMD4-205ENST00000562310 PYURFQ96I23 114 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 YIPF2Q9BWQ6 316 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 ALOXE3Q9BYJ1 711 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CXorf21Q9HAI6 301 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 FBXO8Q9NRD0 319 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 C14orf105Q9NVL8 296 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 CALML5Q9NZT1 146 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 LIPT1Q9Y234 373 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 PCDHGA1Q9Y5H4 931 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 GPR179Q6PRD1 2367 aa13.37□□□□□ -0.27
COMMD4-205ENST00000562310 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 B4E171 279 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CPNE3O75131 537 aaKnown RBP13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PRKD3O94806 890 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 ZNF682O95780 498 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 BCHEP06276 602 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 TFPTP0C1Z6 253 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CDK4P11802 303 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PTGER1P34995 402 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 TSPAN7P41732 249 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CLCN2P51788 898 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 PDX1P52945 283 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CRISP3P54108 245 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 CASP9P55211 416 aa13.36□□□□□ -0.27
COMMD4-205ENST00000562310 MRPS35P82673 323 aaKnown RBP13.36□□□□□ -0.27
COMMD4-205ENST00000562310 MGAT2Q10469 447 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms