RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 PROX2Q3B8N5 592 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 PUS10Q3MIT2 529 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 DEFB134Q4QY38 66 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ZNF542PQ5EBM4 170 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ATAD3BQ5T9A4 648 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 USP53Q70EK8 1073 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 CLVS1Q8IUQ0 354 aaPredicted RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 SPARTQ8N0X7 666 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 DEPDC4Q8N2C3 294 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 CSNK1A1LQ8N752 337 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 FAM46DQ8NEK8 389 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 NUP43Q8NFH3 380 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 OR4K14Q8NGD5 310 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 OR13F1Q8NGS4 319 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 OR9A2Q8NGT5 310 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 XAGE5Q8WWM1 108 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 TRNT1Q96Q11 434 aaKnown RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ALPK1Q96QP1 1244 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 OR7D2Q96RA2 312 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 NODALQ96S42 347 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 PINK1Q9BXM7 581 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ACTRT3Q9BYD9 372 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 TPSD1Q9BZJ3 242 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 TRIM45Q9H8W5 580 aaPredicted RBP11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 C2orf42Q9NWW7 574 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 PTGFRNQ9P2B2 879 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 ACAD8Q9UKU7 415 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 TMCC3Q9ULS5 477 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 SLC9A8Q9Y2E8 581 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 SLC22A7Q9Y694 548 aa11.9□□□□□ -0.5
AC055717.2-201ENST00000561864 F5P12259 2224 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 LOC105369274A0A096LPK9 316 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 LOC102723532A0A0G2JNH3 316 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 A0A1W2PR77 199 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 LILRA5A6NI73 299 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 B4DGG1 531 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 J3KTA2 159 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 SYT5O00445 386 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 B4GAT1O43505 415 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 SEC14L2O76054 403 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 ADAP00813 363 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 H1F0P07305 194 aaKnown RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 CHRM4P08173 479 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 HTR1AP08908 422 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 C8orf89P0DMQ9 161 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 ALPPL2P10696 532 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 PVRP15151 417 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 AGXTP21549 392 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 CD38P28907 300 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 SLC5A2P31639 672 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 MAN2A2P49641 1150 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 MAPK10P53779 464 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 PRKAG1P54619 331 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 RACK1P63244 317 aaKnown RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 FUT5Q11128 374 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 DYNC1I2Q13409 638 aaKnown RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 FZD5Q13467 585 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 RUNX2Q13950 521 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 XAF1Q6GPH4 301 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 B3GNT8Q7Z7M8 397 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 GKN2Q86XP6 184 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 OR4N4Q8N0Y3 316 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 LINC00471Q8N535 108 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 BPIFB6Q8NFQ5 453 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 CNIH3Q8TBE1 160 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 IPCEF1Q8WWN9 437 aaPredicted RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 MUL1Q969V5 352 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 ISOC1Q96CN7 298 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 MPP4Q96JB8 637 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 DOK1Q99704 481 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 CCDC3Q9BQI4 270 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 DUSP21Q9H596 190 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 WNT16Q9UBV4 365 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 PCDHGB1Q9Y5G3 927 aa11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 SNRNP200O75643 2136 aaKnown RBP11.89□□□□□ -0.51
AC055717.2-201ENST00000561864 DSPPQ9NZW4 1301 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 DUXAA6NLW8 204 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 PCDH17O14917 1159 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 GALR3O60755 368 aaPredicted RBP11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 CPMP14384 443 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 FASLGP48023 281 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 XKP51811 444 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 MVKQ03426 396 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 C1orf61Q13536 156 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 FAM214AQ32MH5 1076 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 CYP27C1Q4G0S4 372 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 GPAT3Q53EU6 434 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 ZNF770Q6IQ21 691 aaPredicted RBP11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 TCTN3Q6NUS6 607 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 MFSD12Q6NUT3 480 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 CDC73Q6P1J9 531 aa11.88□□□□□ -0.51
AC055717.2-201ENST00000561864 DGLUCYQ7Z3D6 616 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms