RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 LRRC45Q96CN5 670 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 SPACA9Q96E40 222 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 MRFAP1L1Q96HT8 127 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 RUNDC3BQ96NL0 473 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 GNRHR2Q96P88 292 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PANX3Q96QZ0 392 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PKP4Q99569 1192 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 GORASP1Q9BQQ3 440 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 FAM129AQ9BZQ8 928 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 PROK2Q9HC23 129 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 FAM114A2Q9NRY5 505 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 DNAJC11Q9NVH1 559 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 CNIH4Q9P003 139 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 FEZ2Q9UHY8 353 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 RNF115Q9Y4L5 304 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 MMACHCQ9Y4U1 282 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 EPN1Q9Y6I3 576 aaPredicted RBP4.78□□□□□ -1.64
HERC1-213ENST00000561359 PRR14LQ5THK1 2151 aa4.78□□□□□ -1.64
HERC1-213ENST00000561359 UQCRHLA0A096LP55 91 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 LRRC53A6NM62 1247 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 LGALS16A8MUM7 142 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TRIM77I1YAP6 450 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PRMT5O14744 637 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 CST8O60676 142 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TRIM3O75382 744 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 KCNH1O95259 989 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TGM6O95932 706 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FTCDO95954 541 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ACTL6AO96019 429 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 GOT2P00505 430 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 CATP04040 527 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 CRHP06850 196 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FESP07332 822 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 RBP3P10745 1247 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 NAT2P11245 290 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 SKILP12757 684 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 APEHP13798 732 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 CPN1P15169 458 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PPP3CBP16298 524 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PAMP19021 973 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TNNI3P19429 210 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 HNF4AP41235 474 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 SLC6A12P48065 614 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 RAB8AP61006 207 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 RGS1Q08116 209 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TFDP2Q14188 446 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 GGTLC2Q14390 218 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ELAVL1Q15717 326 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 MPEG1Q2M385 716 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 VMACQ2NL98 169 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PGGHGQ32M88 737 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 DPCR1Q3MIW9 517 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 KBTBD12Q3ZCT8 623 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FASTKD1Q53R41 847 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 ADAM5Q6NVV9 412 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 AFTPHQ6ULP2 937 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ENPP6Q6UWR7 440 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 CLNKQ7Z7G1 428 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ADGRE4PQ86SQ3 457 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 YRDCQ86U90 279 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 VSIG1Q86XK7 387 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 IGDCC3Q8IVU1 814 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 SCUBE1Q8IWY4 988 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FAM169BQ8N8A8 192 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ZNF321PQ8N8H1 164 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 SNX31Q8N9S9 440 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ZNF610Q8N9Z0 462 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 MFSD9Q8NBP5 474 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FAM83FQ8NEG4 500 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 OR8K3Q8NH51 312 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 LILRB1Q8NHL6 650 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 FAM216AQ8WUB2 273 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ZNF480Q8WV37 535 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 ATL1Q8WXF7 558 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 HTRA1Q92743 480 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PROX1Q92786 737 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 P3H4Q92791 437 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 DIO2Q92813 273 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 C3orf49Q96BT1 292 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 HAUS1Q96CS2 278 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 C11orf24Q96F05 449 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 ZNF845Q96IR2 970 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 QKIQ96PU8 341 aaKnown RBP eCLIP4.77□□□□□ -1.65
HERC1-213ENST00000561359 TACO1Q9BSH4 297 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 MCMBPQ9BTE3 642 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 TRAF4Q9BUZ4 470 aaPredicted RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 ZNF747Q9BV97 191 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 UBQLN3Q9H347 655 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 C10orf88Q9H8K7 445 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 CLK4Q9HAZ1 481 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PRTFDC1Q9NRG1 225 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 FAIMQ9NVQ4 179 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 PIH1D1Q9NWS0 290 aaKnown RBP4.77□□□□□ -1.65
HERC1-213ENST00000561359 CTTNBP2NLQ9P2B4 639 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 CLCF1Q9UBD9 225 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 COPS7AQ9UBW8 275 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 MYO6Q9UM54 1294 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 B3GALT5Q9Y2C3 310 aa4.77□□□□□ -1.65
HERC1-213ENST00000561359 CHCHD2Q9Y6H1 151 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms