RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 C3orf30Q96M34 536 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 TSSK3Q96PN8 268 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 NKIRAS1Q9NYS0 192 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 BCAP29Q9UHQ4 241 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 CROCCQ5TZA2 2017 aa18.43■□□□□ 0.54
TSPAN3-210ENST00000561277 C2orf92A0A1B0GVN3 265 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PEX11AO75192 247 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ZIC2O95409 532 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 CRYABP02511 175 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PCSK2P16519 638 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 GPR85P60893 370 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 MAP4K2Q12851 820 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 STX3Q13277 289 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 EXOSC7Q15024 291 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PDCD2Q16342 344 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PRSS53Q2L4Q9 553 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 MPEG1Q2M385 716 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PIGGQ5H8A4 983 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 OPN5Q6U736 354 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 GPALPP1Q8IXQ4 340 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 SAMD14Q8IZD0 417 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF615Q8N8J6 731 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 FAM98AQ8NCA5 519 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 SIMC1Q8NDZ2 872 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 OR9A2Q8NGT5 310 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 NR4A3Q92570 626 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 FCRL1Q96LA6 429 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PPP1R36Q96LQ0 422 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 PPP3R2Q96LZ3 170 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 BBS4Q96RK4 519 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 CCT7Q99832 543 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 EXO1Q9UQ84 846 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 TMED5Q9Y3A6 229 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 RAP2CQ9Y3L5 183 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ANKUB1A6NFN9 424 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 LRATO95237 230 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 CBX6O95503 412 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 JUNP05412 331 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 H2AFXP16104 143 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 S1PR1P21453 382 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 MGAT2Q10469 447 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ELOAQ14241 798 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ATP6AP1LQ52LC2 224 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 TRMT12Q53H54 448 aaKnown RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 HLA-DQA1Q5Y7H0 255 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ANKRD26P1Q6NSI1 321 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 OR7G1Q8NGA0 311 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 C16orf52Q8NHV5 167 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 FRMD6Q96NE9 622 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 SORT1Q99523 831 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 SLX1AQ9BQ83 275 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 ANKRA2Q9H9E1 313 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 TIMMDC1Q9NPL8 285 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 BAIAP2L1Q9UHR4 511 aa18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 KLF13Q9Y2Y9 288 aaPredicted RBP18.42■□□□□ 0.54
TSPAN3-210ENST00000561277 AKAP10O43572 662 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 NADKO95544 446 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 MST1P26927 711 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 SOX18P35713 384 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 NR0B1P51843 470 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 BST1Q10588 318 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 NNATQ16517 81 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 EIF2S3LQ2VIR3 472 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF628Q5EBL2 1059 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 AGBL2Q5U5Z8 902 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF324BQ6AW86 544 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 HDXQ7Z353 690 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 SULF2Q8IWU5 870 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 FAM9CQ8IZT9 166 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 CPSF7Q8N684 471 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 ST6GALNAC3Q8NDV1 305 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 PSD4Q8NDX1 1056 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 OR52R1Q8NGF1 315 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 PRR7Q8TB68 274 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 KAT2AQ92830 837 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 CTHRC1Q96CG8 243 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 TUBGCP3Q96CW5 907 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 C1orf50Q9BV19 199 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 TSPAN10Q9H1Z9 355 aaPredicted RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 DTX4Q9Y2E6 619 aa18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 WBP11Q9Y2W2 641 aaKnown RBP18.41■□□□□ 0.54
TSPAN3-210ENST00000561277 FLNCQ14315 2725 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 ASPDHA6ND91 283 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 CBX7O95931 251 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 BCKDHAP12694 445 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 EDN3P14138 238 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 MPIP34949 423 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 RFC3P40938 356 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 MEOX1P50221 254 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 NCBP2P52298 156 aaKnown RBP eCLIP18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 DUSP8Q13202 625 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 RTL4Q6ZR62 310 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 FNDC5Q8NAU1 212 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 DNAJB8Q8NHS0 232 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF675Q8TD23 568 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 ZNF639Q9UID6 485 aa18.4■□□□□ 0.54
TSPAN3-210ENST00000561277 SVILO95425 2214 aa18.39■□□□□ 0.53
TSPAN3-210ENST00000561277 G3V3Y1 287 aa18.39■□□□□ 0.53
TSPAN3-210ENST00000561277 PEX1O43933 1283 aa18.39■□□□□ 0.53
TSPAN3-210ENST00000561277 GPX3P22352 226 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms