RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NINQ8N4C6 2090 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 MREGQ8N565 214 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 TMEM251Q8N6I4 163 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF441Q8N8Z8 693 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 RIT1Q92963 219 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 GAL3ST4Q96RP7 486 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 TMEM109Q9BVC6 243 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PROK2Q9HC23 129 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 EML4Q9HC35 981 aaKnown RBP14.72□□□□□ -0.05
LMX1B-204ENST00000561065 MID1IP1Q9NPA3 183 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 RRAGDQ9NQL2 400 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-204ENST00000561065 TUBA8Q9NY65 449 aaPredicted RBP14.72□□□□□ -0.05
LMX1B-204ENST00000561065 PLLPQ9Y342 182 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 HCFC1P51610 2035 aa14.72□□□□□ -0.05
LMX1B-204ENST00000561065 G3V2L1 256 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 TRIM13O60858 407 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 ERLIN1O75477 346 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 CLDN14O95500 239 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 CHEK2O96017 543 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SNRPB2P08579 225 aaKnown RBP14.71□□□□□ -0.05
LMX1B-204ENST00000561065 CNR1P21554 472 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 PIGAP37287 484 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 MAGEA5P43359 124 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SMSP52788 366 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 ACSM2AQ08AH3 577 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 TBL3Q12788 808 aaKnown RBP14.71□□□□□ -0.05
LMX1B-204ENST00000561065 IMPG1Q17R60 797 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 NDUFAF5Q5TEU4 345 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 PRAMEF20Q5VT98 475 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 ACSM2BQ68CK6 577 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 ARHGAP11AQ6P4F7 1023 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 RNF111Q6ZNA4 994 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 GK5Q6ZS86 529 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 FAM47EQ6ZV65 393 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SLC29A4Q7RTT9 530 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 COMMD6Q7Z4G1 85 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 C4orf33Q8N1A6 199 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SPACA9Q96E40 222 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SGCZQ96LD1 299 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 FAM173AQ9BQD7 235 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SHCBP1LQ9BZQ2 653 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 CXorf21Q9HAI6 301 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 SACM1LQ9NTJ5 587 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 MKS1Q9NXB0 559 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 LGALS13Q9UHV8 139 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 WBP11Q9Y2W2 641 aaKnown RBP14.71□□□□□ -0.05
LMX1B-204ENST00000561065 ZNF780BQ9Y6R6 833 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 FREM3P0C091 2139 aa14.71□□□□□ -0.05
LMX1B-204ENST00000561065 OTOGQ6ZRI0 2925 aa14.71□□□□□ -0.06
LMX1B-204ENST00000561065 GNG14A0A1W2PPG7 69 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SERTM1A2A2V5 107 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 LRRC3CA6NJW4 275 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 OR6C76A6NM76 312 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 CAPN14A8MX76 684 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 ACOT7O00154 380 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 LRATO95237 230 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 IGHG3P01860 377 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 FBXO45P0C2W1 286 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 MYZAPP0CAP1 466 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 DRD2P14416 443 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SOX18P35713 384 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 DUSP2Q05923 314 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 HEPACAMQ14CZ8 416 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 TRABD2AQ86V40 505 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SLC22A16Q86VW1 577 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SRRM1Q8IYB3 904 aaKnown RBP14.7□□□□□ -0.06
LMX1B-204ENST00000561065 DND1Q8IYX4 353 aaKnown RBP14.7□□□□□ -0.06
LMX1B-204ENST00000561065 FAM109AQ8N4B1 249 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SLC15A4Q8N697 577 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 OR10G3Q8NGC4 313 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 SLC22A8Q8TCC7 542 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 PAQR8Q8TEZ7 354 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 APOPT1Q96IL0 206 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 METTL2AQ96IZ6 378 aaKnown RBP14.7□□□□□ -0.06
LMX1B-204ENST00000561065 TRIM8Q9BZR9 551 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 IL1RL2Q9HB29 575 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 PFDN4Q9NQP4 134 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 TNFRSF10DQ9UBN6 386 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 MCM8Q9UJA3 840 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 CFL2Q9Y281 166 aa14.7□□□□□ -0.06
LMX1B-204ENST00000561065 CHCHD2Q9Y6H1 151 aaPredicted RBP14.7□□□□□ -0.06
LMX1B-204ENST00000561065 RGS16O15492 202 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 UROSP10746 265 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 CHN1P15882 459 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 PORP16435 677 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 ENDOUP21128 410 aaKnown RBP14.69□□□□□ -0.06
LMX1B-204ENST00000561065 KIR3DL1P43629 444 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 HTR6P50406 440 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 XKP51811 444 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 HYAL4Q2M3T9 481 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 KRT71Q3SY84 523 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 SPDYAQ5MJ70 313 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 HLA-DQA1Q5Y7H0 255 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 TMEM64Q6YI46 380 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 TRILQ7L0X0 811 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 GALNT12Q8IXK2 581 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 ZNF615Q8N8J6 731 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 BANPQ8N9N5 519 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 OR2W6PQ8NHA6 318 aa14.69□□□□□ -0.06
LMX1B-204ENST00000561065 FAM76AQ8TAV0 307 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms