RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 FAM47E-STBD1D6RA91 191 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 TP53I11O14683 189 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 OTCP00480 354 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 RPS17P08708 135 aaKnown RBP14.88□□□□□ -0.03
SNX1-213ENST00000561026 CPMP14384 443 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 CNTFP26441 200 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 MAPK12P53778 367 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 FBXW4P57775 412 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 TESK1Q15569 626 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 SGO1Q5FBB7 561 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 TMEM198Q66K66 360 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 COMMD6Q7Z4G1 85 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 LIX1LQ8IVB5 337 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 C17orf47Q8NEP4 570 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 OR7G1Q8NGA0 311 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 DCAKDQ8WVC6 231 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 ADIPOR1Q96A54 375 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 C16orf45Q96MC5 204 aaPredicted RBP14.88□□□□□ -0.03
SNX1-213ENST00000561026 FMO2Q99518 471 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 SLC6A15Q9H2J7 730 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 MRPL46Q9H2W6 279 aaKnown RBP14.88□□□□□ -0.03
SNX1-213ENST00000561026 SLC24A3Q9HC58 644 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 FARSBQ9NSD9 589 aaKnown RBP14.88□□□□□ -0.03
SNX1-213ENST00000561026 KCNN3Q9UGI6 736 aa14.88□□□□□ -0.03
SNX1-213ENST00000561026 POC1B-GALNT4F8VUJ3 575 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 PPP6CO00743 305 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 GUCY1B2O75343 617 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 SNX4O95219 450 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 PORP16435 677 aaPredicted RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 S1PR1P21453 382 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 NT5EP21589 574 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 GDF1P27539 372 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 ECHS1P30084 290 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 TRPC1P48995 793 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 TMED10P49755 219 aaKnown RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 CDH13P55290 713 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 NRG3P56975 720 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 RIPPLY2Q5TAB7 128 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 BICRALQ6AI39 1079 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 LETMD1Q6P1Q0 360 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 RPS27LQ71UM5 84 aaKnown RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 ULK2Q8IYT8 1036 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 LIX1Q8N485 282 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 TMEM151AQ8N4L1 468 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 NOA1Q8NC60 698 aaKnown RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 MYRIPQ8NFW9 859 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 SPPL2AQ8TCT8 520 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 ZNF483Q8TF39 744 aaPredicted RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 ZNF597Q96LX8 424 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 RILPQ96NA2 401 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 SECISBP2Q96T21 854 aaKnown RBP14.87□□□□□ -0.03
SNX1-213ENST00000561026 ZNF559Q9BR84 538 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 ANGPTL4Q9BY76 406 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 CES1P1Q9UKY3 287 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 SLC12A4Q9UP95 1085 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 PCDHA9Q9Y5H5 950 aa14.87□□□□□ -0.03
SNX1-213ENST00000561026 C1orf226A1L170 272 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 TRIM49D1C9J1S8 452 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 PDYNP01213 254 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 SBK3P0C264 359 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 GALNT1Q10472 559 aaPredicted RBP14.86□□□□□ -0.03
SNX1-213ENST00000561026 DUSP8Q13202 625 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 SLC25A35Q3KQZ1 300 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 C6orf163Q5TEZ5 329 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 CES4AQ5XG92 561 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 SLC48A1Q6P1K1 146 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 SEM1Q6ZVN7 128 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 PACS2Q86VP3 889 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 UHMK1Q8TAS1 419 aaKnown RBP14.86□□□□□ -0.03
SNX1-213ENST00000561026 C1QTNF3Q9BXJ4 246 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 BRF2Q9HAW0 419 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 SNX6Q9UNH7 406 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 NCKAP5O14513 1909 aa14.86□□□□□ -0.03
SNX1-213ENST00000561026 C15orf38-AP3S2A0A0A6YYH1 394 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 GOLGA6L10A6NI86 522 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 A8MT66 165 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 AHRRA9YTQ3 701 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 TRAPPC6AO75865 159 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ATP1B1P05026 303 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 TSPAN8P19075 237 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 GPX3P22352 226 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 ABCD3P28288 659 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 CASP3P42574 277 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 DLX5P56178 289 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 RPP38P78345 283 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 MGAT2Q10469 447 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 MAP4K2Q12851 820 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 MYBPHQ13203 477 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 PRICKLE4Q2TBC4 344 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 GLE1Q53GS7 698 aaKnown RBP14.85□□□□□ -0.03
SNX1-213ENST00000561026 FNDC7Q5VTL7 733 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 SPNS3Q6ZMD2 512 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 PRR22Q8IZ63 422 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 VWA5B2Q8N398 1253 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 MNS1Q8NEH6 495 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 SELENOMQ8WWX9 145 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 TM4SF18Q96CE8 201 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 GNRHR2Q96P88 292 aa14.85□□□□□ -0.03
SNX1-213ENST00000561026 TIMP4Q99727 224 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms