RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 ZNF354AO60765 605 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 CBX7O95931 251 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 MAPK1P28482 360 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 DUSP8Q13202 625 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 MPEG1Q2M385 716 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 SMU1Q2TAY7 513 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF385BQ569K4 471 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 RPUSD3Q6P087 351 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 FAM111BQ6SJ93 734 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF75CPQ92670 426 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 SCMH1Q96GD3 660 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 PPP1R36Q96LQ0 422 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 RASL10BQ96S79 203 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 BARD1Q99728 777 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 UTP23Q9BRU9 249 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 C1orf50Q9BV19 199 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 NUF2Q9BZD4 464 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 BRINP2Q9C0B6 783 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 WWTR1Q9GZV5 400 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 ACBD3Q9H3P7 528 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 REEP4Q9H6H4 257 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 AKTIPQ9H8T0 292 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 MEAF6Q9HAF1 191 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 BAIAP2L1Q9UHR4 511 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 NTNG1Q9Y2I2 539 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 YARS2Q9Y2Z4 477 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 PCDHGB6Q9Y5F9 930 aa14.36□□□□□ -0.11
RABGGTA-219ENST00000560871 WWP2O00308 870 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 SDHDO14521 159 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR2J2O76002 312 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 PRPS2P11908 318 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 ASMTP46597 345 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 HLCSP50747 726 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 SSR4P51571 173 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 MRPS35P82673 323 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 PTGR1Q14914 329 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR1C1Q15619 314 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 FHL5Q5TD97 284 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 C6orf163Q5TEZ5 329 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 CCDC116Q8IYX3 515 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 LRRC34Q8IZ02 419 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 LIX1Q8N485 282 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 ZNF441Q8N8Z8 693 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 SIMC1Q8NDZ2 872 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 ADCY4Q8NFM4 1077 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR7G1Q8NGA0 311 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR5L2Q8NGL0 311 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR9A2Q8NGT5 310 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 GFM2Q969S9 779 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 HES7Q9BYE0 225 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 OR10A5Q9H207 317 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 GIMAP4Q9NUV9 329 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 LRFN1Q9P244 771 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 MARCOQ9UEW3 520 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 DTX4Q9Y2E6 619 aa14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 COPG1Q9Y678 874 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 FLNBO75369 2602 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-219ENST00000560871 SCAMP2O15127 329 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 HDAC3O15379 428 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 LRATO95237 230 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 CBX6O95503 412 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 PCSK2P16519 638 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 FRKP42685 505 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 CYB561P49447 251 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 EMX2Q04743 252 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 MAD2L1Q13257 205 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 MRPL49Q13405 166 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 INAQ16352 499 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 TRMT12Q53H54 448 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 IL23RQ5VWK5 629 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 SPINK14Q6IE38 97 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 ANKRD26P1Q6NSI1 321 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 LYPD8Q6UX82 237 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 LARP4Q71RC2 724 aaKnown RBP eCLIP14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 SLC29A4Q7RTT9 530 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 MAVSQ7Z434 540 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 FAM9CQ8IZT9 166 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 C16orf52Q8NHV5 167 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 MTERF3Q96E29 417 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 C7orf26Q96N11 449 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 BBS4Q96RK4 519 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 GAL3ST4Q96RP7 486 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 GLIPR2Q9H4G4 154 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 ATP6V1HQ9UI12 483 aa14.34□□□□□ -0.11
RABGGTA-219ENST00000560871 CYSRT1A8MQ03 144 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 ZNF195O14628 629 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 PDPK1O15530 556 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 AKAP10O43572 662 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 OR6B1O95007 311 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 KITP10721 976 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 G6PDP11413 515 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 GPX3P22352 226 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 NTSP30990 170 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 MPIP34949 423 aa14.33□□□□□ -0.12
RABGGTA-219ENST00000560871 SOX3P41225 446 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms