RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 ZNF783Q6ZMS7 281 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 PLEKHG7Q6ZR37 379 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FAM43BQ6ZT52 329 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 LRRC70Q7Z2Q7 622 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 PIWIL3Q7Z3Z3 882 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 CAMKMTQ7Z624 323 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 SERPINA11Q86U17 422 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ZNF329Q86UD4 541 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RALGPS2Q86X27 583 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 CCDC71Q8IV32 467 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 LIX1LQ8IVB5 337 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ZDHHC21Q8IVQ6 265 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 SCN4BQ8IWT1 228 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 HS3ST5Q8IZT8 346 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FAM9CQ8IZT9 166 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RBFAQ8N0V3 343 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CADM3Q8N126 398 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 C10orf111Q8N326 155 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ELMOD1Q8N336 334 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 LIX1Q8N485 282 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RYBPQ8N488 228 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 TMCO5AQ8N6Q1 288 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ARL10Q8N8L6 244 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 L3MBTL4Q8NA19 623 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 DCAF4L2Q8NA75 395 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ZNF555Q8NEP9 628 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 TRPV1Q8NER1 839 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 LPCAT1Q8NF37 534 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 OR7A2PQ8NGA2 310 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 OR4F6Q8NGB9 312 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 OR6Q1Q8NGQ2 317 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FBXO30Q8TB52 745 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 NDNFQ8TB73 568 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CNIH3Q8TBE1 160 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 LKAAEAR1Q8TD35 194 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MCOLN3Q8TDD5 553 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 WFIKKN2Q8TEU8 576 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ZFP90Q8TF47 636 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 EEF1AKMT1Q8WVE0 214 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 IPCEF1Q8WWN9 437 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 OVCA2Q8WZ82 227 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 STARD8Q92502 1023 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FIG4Q92562 907 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FAM162AQ96A26 154 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 EFHD2Q96C19 240 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 PYCR2Q96C36 320 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 TXNDC15Q96J42 360 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MRGPRX4Q96LA9 322 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CCDC138Q96M89 665 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RPRD1AQ96P16 312 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 ACOX2Q99424 681 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ZBTB18Q99592 522 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 EPYCQ99645 322 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 SH3GL1Q99961 368 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 C17orf80Q9BSJ5 609 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 PTDSS2Q9BVG9 487 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CINPQ9BW66 212 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 DGCR6LQ9BY27 220 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 FAM126AQ9BYI3 521 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 ACPTQ9BZG2 426 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 NXF2Q9GZY0 626 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 CHST8Q9H2A9 424 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ARMC7Q9H6L4 198 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 EPS8L2Q9H6S3 715 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RMND5AQ9H871 391 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 SP140LQ9H930 580 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 RDH14Q9HBH5 336 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 LRTM1Q9HBL6 345 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 TM9SF3Q9HD45 589 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 LTB4R2Q9NPC1 389 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ACOT13Q9NPJ3 140 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 TLR8Q9NR97 1041 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 PLCXD1Q9NUJ7 323 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MRPS18AQ9NVS2 196 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 ELOVL2Q9NXB9 296 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CD274Q9NZQ7 290 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 IL17CQ9P0M4 197 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 KLHL42Q9P2K6 505 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 GALPQ9UBC7 116 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 UBA2Q9UBT2 640 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 WARS2Q9UGM6 360 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 DAPK2Q9UIK4 370 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 OSGIN1Q9UJX0 560 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 BAG5Q9UL15 447 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 AGO1Q9UL18 857 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 PADI3Q9ULW8 664 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MAFFQ9ULX9 164 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 ABCG2Q9UNQ0 655 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 SAMD4AQ9UPU9 718 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 EIF3LQ9Y262 564 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 TPRKBQ9Y3C4 175 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 PKP3Q9Y446 797 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MAGED1Q9Y5V3 778 aaPredicted RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 SNX5Q9Y5X3 404 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 MRPL42Q9Y6G3 142 aaKnown RBP2.35□□□□□ -2.03
SPG11-223ENST00000560858 DGKBQ9Y6T7 804 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 V9GYQ6 96 aa2.35□□□□□ -2.03
SPG11-223ENST00000560858 CKAP5Q14008 2032 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 NINQ8N4C6 2090 aa2.34□□□□□ -2.03
SPG11-223ENST00000560858 IGLV3-16A0A075B6K0 115 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms