RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ITGB5P18084 799 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MAGEA12P43365 314 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ADORA2A-AS1P86434 159 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CDH17Q12864 832 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SPP2Q13103 211 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 BAATQ14032 418 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PIGHQ14442 188 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 IL13RA2Q14627 380 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ZNF169Q14929 603 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ANGPT1Q15389 498 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TSC22D1Q15714 1073 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 KIF19Q2TAC6 998 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 HKDC1Q2TB90 917 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SPATS1Q496A3 300 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 GPRIN3Q6ZVF9 776 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 GALNT10Q86SR1 603 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ZSWIM9Q86XI8 627 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 KDM8Q8N371 416 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 C9orf62Q8N4C0 152 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SIRT6Q8N6T7 355 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PTGR2Q8N8N7 351 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 OR13C2Q8NGS9 318 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 OR9A1PQ8NGU1 263 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 NPIPB3Q92617 1050 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RBPMSQ93062 196 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 REPS1Q96D71 796 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SERPINB11Q96P15 392 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TRNT1Q96Q11 434 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 HIST1H2AAQ96QV6 131 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MBOAT4Q96T53 435 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 HOPXQ9BPY8 73 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 NFKBIZQ9BYH8 718 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 BCL2L14Q9BZR8 327 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PAK6Q9NQU5 681 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC6A13Q9NSD5 602 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CCDC167Q9P0B6 97 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 KAT6AQ92794 2004 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3DA0A087WVF3 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3IA0A087WXS9 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3EA0A087X179 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3KA0A087X1G2 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RPS10-NUDT3A0A1W2PQS6 291 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PMS2P1A4D2B8 440 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC35F4A4IF30 521 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3FA6NER0 549 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3LB9A6J9 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 UPK1AO00322 258 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 NDUFS6O75380 124 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TSPAN12O95859 305 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TRUB2O95900 331 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CDK1P06493 297 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3HP0C7X1 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SRFP11831 508 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RYKP34925 604 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RPL35P42766 123 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CCT3P49368 545 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MEOX2P50222 304 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 BACE1P56817 501 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ERVK-8P63133 956 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RIPPLY1Q0D2K3 151 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SNTB2Q13425 540 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PRPSAP1Q14558 356 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CXorf66Q5JRM2 361 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PRAMEF20Q5VT98 475 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 STEAP4Q687X5 459 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3GQ6DHY5 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3CQ6IPX1 549 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SCARA5Q6ZMJ2 495 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SYVN1Q86TM6 617 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 TBC1D3Q8IZP1 549 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SHISA5Q8N114 240 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 BCL6BQ8N143 479 aaPredicted RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC2A12Q8TD20 617 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 ELP5Q8TE02 316 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 RSC1A1Q92681 617 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC38A4Q969I6 547 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 C12orf42Q96LP6 360 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 HYLS1Q96M11 299 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC30A2Q9BRI3 323 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MESP1Q9BRJ9 268 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 PELOQ9BRX2 385 aaKnown RBP6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 UGT2B28Q9BY64 529 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC19A3Q9BZV2 496 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 AMBRA1Q9C0C7 1298 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC22A4Q9H015 551 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 OR10A5Q9H207 317 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 DUSP21Q9H596 190 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MINDY3Q9H8M7 445 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 LRRC4Q9HBW1 653 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 NRBP2Q9NSY0 501 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 MTMR10Q9NXD2 777 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 CD274Q9NZQ7 290 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 SLC17A6Q9P2U8 582 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 FKBP7Q9Y680 259 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 U3KQV3 271 aa6.38□□□□□ -1.39
TSPAN3-209ENST00000560715 B4DXG7 233 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 H0YIV9 168 aa6.37□□□□□ -1.39
TSPAN3-209ENST00000560715 TEX46H3BTG2 121 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms