RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 TGFBR3LH3BV60 316 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 PLOD2O00469 737 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 GSTA4O15217 222 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 TNFRSF21O75509 655 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 BMP10O95393 424 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 MT-CO3P00414 261 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 NUDT7P0C024 238 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 PABPC4LP0CB38 370 aaKnown RBP10.51□□□□□ -0.73
USP3-218ENST00000560202 CDK4P11802 303 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ETFAP13804 333 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 GGT1P19440 569 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ATP6V1B2P21281 511 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 MAOAP21397 527 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 NT5EP21589 574 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 PRKAG1P54619 331 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 CLDN6P56747 220 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 DCDP81605 110 aaKnown RBP10.51□□□□□ -0.73
USP3-218ENST00000560202 PRR5P85299 388 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 TP53BP2Q13625 1128 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ADRM1Q16186 407 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 LIN52Q52LA3 116 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ZNF628Q5EBL2 1059 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 VWA2Q5GFL6 755 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ZNF385CQ66K41 422 aaPredicted RBP10.51□□□□□ -0.73
USP3-218ENST00000560202 GLYATQ6IB77 296 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 LCN8Q6JVE9 175 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ERICH5Q6P6B1 374 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 DHRS13Q6UX07 377 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 COX15Q7KZN9 410 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 SZRD1Q7Z422 152 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 SPATA24Q86W54 205 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 PTOV1Q86YD1 416 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 ZC3H7AQ8IWR0 971 aaKnown RBP10.51□□□□□ -0.73
USP3-218ENST00000560202 ZZZ3Q8IYH5 903 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 OR56A1Q8NGH5 318 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 SLC26A7Q8TE54 656 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 PPWD1Q96BP3 646 aaKnown RBP10.51□□□□□ -0.73
USP3-218ENST00000560202 ALOXE3Q9BYJ1 711 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 TRIM15Q9C019 465 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 SLC39A1Q9NY26 324 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 LOXL2Q9Y4K0 774 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 CLDN16Q9Y5I7 305 aa10.51□□□□□ -0.73
USP3-218ENST00000560202 CUL9Q8IWT3 2517 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 UPK1AO00322 258 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CXCR6O00574 342 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 OR10H2O60403 315 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CPNE3O75131 537 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 CSO75390 466 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 GMNNO75496 209 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SLITRK5O94991 958 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 ONECUT2O95948 504 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 LYNP07948 512 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 BMP2P12643 396 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 ITIH1P19827 911 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 RORAP35398 523 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SOX18P35713 384 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PRIM2P49643 509 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 LIMK1P53667 647 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 RPS26P62854 115 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 BIKQ13323 160 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SERTAD2Q14140 314 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 VMACQ2NL98 169 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PRICKLE4Q2TBC4 344 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CNPY1Q3B7I2 92 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 NKAIN1Q4KMZ8 207 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MFSD4BQ5TF39 518 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FAM111BQ6SJ93 734 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 CEACAM20Q6UY09 585 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 QSOX2Q6ZRP7 698 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 RAB11FIP2Q7L804 512 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 ASCL5Q7RTU5 278 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SLCO6A1Q86UG4 719 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 SPPL2CQ8IUH8 684 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 NUP43Q8NFH3 380 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 OR7G2Q8NG99 324 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 ZNF675Q8TD23 568 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FIG4Q92562 907 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 LIN37Q96GY3 246 aaPredicted RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 RBM18Q96H35 190 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 SLC35G5Q96KT7 338 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PTCHD1Q96NR3 888 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PHOX2BQ99453 314 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 ANKRA2Q9H9E1 313 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 NECTIN3Q9NQS3 549 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 DDX18Q9NVP1 670 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 NTMQ9P121 344 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 PTGFRNQ9P2B2 879 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FAF1Q9UNN5 650 aaPredicted RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 COL27A1Q8IZC6 1860 aaPredicted RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 SPTBP11277 2137 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 IGLV3-12A0A075B6K2 115 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 A0A087WV62 115 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 AQP12BA6NM10 295 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MEN1O00255 615 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 FKBP6O75344 327 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 KRT36O76013 467 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 HMGN2P05204 90 aaKnown RBP10.5□□□□□ -0.73
USP3-218ENST00000560202 ZNF28P17035 718 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 MATN1P21941 496 aa10.5□□□□□ -0.73
USP3-218ENST00000560202 STT3AP46977 705 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms