RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CYLC2Q14093 348 aaPredicted RBP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 RCAN2Q14206 197 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 EXOSC7Q15024 291 aaKnown RBP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 MLC1Q15049 377 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 SPRED3Q2MJR0 410 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 TRMT12Q53H54 448 aaKnown RBP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 DCAF10Q5QP82 559 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 IRAK1BP1Q5VVH5 260 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 CPZQ66K79 652 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 C19orf48Q6RUI8 117 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 ZNF621Q6ZSS3 439 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 SNX32Q86XE0 403 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 KBTBD2Q8IY47 623 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 TMEM102Q8N9M5 508 aaPredicted RBP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 CLEC1AQ8NC01 280 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 NCLNQ969V3 563 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 ELP4Q96EB1 424 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 FBXL20Q96IG2 436 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 INPP5KQ9BT40 448 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 SLC25A23Q9BV35 468 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 CCDC106Q9BWC9 280 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 MYLK2Q9H1R3 596 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 DDX18Q9NVP1 670 aaKnown RBP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMAD6-204ENST00000559931 TAS2R9Q9NYW1 312 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 MAT2BQ9NZL9 334 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 BTNL2Q9UIR0 455 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 SSUH2Q9Y2M2 353 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
SMAD6-204ENST00000559931 A0A087WV48 116 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 A0A1W2PP18 115 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 A8MUI8 341 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 HRKO00198 91 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 RFXANKO14593 260 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 BCAS2O75934 225 aaPredicted RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 SLITRK5O94991 958 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 DDAH2O95865 285 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 GSNP06396 782 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CAPN3P20807 821 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 ITGA3P26006 1051 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 SSTR4P31391 388 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CDK9P50750 372 aaKnown RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CLCN2P51788 898 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 AP2B1P63010 937 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 HBA1P69905 142 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CXADRP78310 365 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 MGAT2Q10469 447 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 AIMP2Q13155 320 aaKnown RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 STX5Q13190 355 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 ZNF628Q5EBL2 1059 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 PLAG1Q6DJT9 500 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 RNF111Q6ZNA4 994 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 MSANTD1Q6ZTZ1 278 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 POU5F2Q8N7G0 328 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 AMER2Q8N7J2 671 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 NFAM1Q8NET5 270 aaPredicted RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 OR7G2Q8NG99 324 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 OR7G1Q8NGA0 311 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 OR1N1Q8NGS0 311 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 M1APQ8TC57 530 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 ZNF675Q8TD23 568 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 TSPEARQ8WU66 669 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 ERP27Q96DN0 273 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 THOC3Q96J01 351 aaKnown RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 CCDC115Q96NT0 180 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 NUDT9Q9BW91 350 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 DEFB126Q9BYW3 111 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 OR10A5Q9H207 317 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 ANKRA2Q9H9E1 313 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 PTGFRNQ9P2B2 879 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
SMAD6-204ENST00000559931 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
SMAD6-204ENST00000559931 MED13Q9UHV7 2174 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 TRBV11-1A0A0K0K1C0 115 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 A6NL46 340 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 K7ENP7 123 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 PLOD2O00469 737 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 EMC8O43402 210 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 PLOD3O60568 738 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 SCN2BO60939 215 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 CELA2AP08217 269 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 COX4I1P13073 169 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 CHI3L1P36222 383 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-204ENST00000559931 CCL11P51671 97 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 PRR5P85299 388 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 FUT7Q11130 342 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 CHAF1BQ13112 559 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 TLR1Q15399 786 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 HLA-DQA1Q5Y7H0 255 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 INO80CQ6PI98 192 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-204ENST00000559931 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
SMAD6-204ENST00000559931 HSDL2Q6YN16 418 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 SLC29A4Q7RTT9 530 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 TRIML2Q8N7C3 387 aa13.35□□□□□ -0.27
SMAD6-204ENST00000559931 ZNF321PQ8N8H1 164 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms