RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 GMNCA6NCL1 334 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ASPDHA6ND91 283 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 SYNDIG1LA6NDD5 238 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 PLOD2O00469 737 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 SIAH2O43255 324 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 SHOX2O60902 331 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 NME6O75414 186 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 C1QCP02747 245 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 FAM87AP0C7U9 286 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 IDO1P14902 403 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 CDK9P50750 372 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 CCL11P51671 97 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 PGDP52209 483 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 DGKQP52824 942 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 RRADP55042 308 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 POLE2P56282 527 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 GNGT1P63211 74 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 RAPSNQ13702 412 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF267Q14586 743 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 MYBPC3Q14896 1274 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 MLC1Q15049 377 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 EXT1Q16394 746 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 GSTA3Q16772 222 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 IGFL2Q6UWQ7 119 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 C16orf47Q6ZP98 133 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ACAD11Q709F0 780 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 GALNT12Q8IXK2 581 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 KBTBD2Q8IY47 623 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 CLECL1Q8IZS7 167 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 CPSF7Q8N684 471 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF441Q8N8Z8 693 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 C7orf57Q8NEG2 295 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 OR8J2Q8NGG1 315 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 PSMA8Q8TAA3 256 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 KAT2AQ92830 837 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 DAZLQ92904 295 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 RIT1Q92963 219 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 RBM18Q96H35 190 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 THOC3Q96J01 351 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 OCSTAMPQ9BR26 566 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 PELOQ9BRX2 385 aaKnown RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 BHLHE41Q9C0J9 482 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 OR8D2Q9GZM6 311 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 LHPPQ9H008 270 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 SERHLQ9NQF3 203 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 MIEF1Q9NQG6 463 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ACSS1Q9NUB1 689 aaPredicted RBP8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ZIM2Q9NZV7 527 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 SH3BP4Q9P0V3 963 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 NTMQ9P121 344 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 PSME2Q9UL46 239 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ERVK-19Q9WJR5 959 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 ZNF780BQ9Y6R6 833 aa8.4□□□□□ -1.06
HMG20A-209ENST00000559728 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 TRBV11-1A0A0K0K1C0 115 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 A6NL46 340 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 UPK1AO00322 258 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 PDPK1O15530 556 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 OR10H2O60403 315 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 SNX3O60493 162 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 PLOD3O60568 738 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 IFI6P09912 130 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 COX7A2P14406 83 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 HOXB9P17482 250 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 TNNI3P19429 210 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 NT5EP21589 574 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 HPCAL1P37235 193 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 MAP3K8P41279 467 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 MC3RP41968 323 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CD97P48960 835 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 EMDP50402 254 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ST13P50502 369 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ATP4BP51164 291 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 NCBP2P52298 156 aaKnown RBP eCLIP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ARFIP2P53365 341 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 RHDQ02161 417 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 EXOSC7Q15024 291 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 EBPQ15125 230 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 FAM174BQ3ZCQ3 159 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CPTPQ5TA50 214 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ZNF468Q5VIY5 522 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 FCRLBQ6BAA4 426 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 OR4F3Q6IEY1 312 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 JMJD6Q6NYC1 403 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 VASH1Q7L8A9 365 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 R3HCC1LQ7Z5L2 792 aaKnown RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 PIGWQ7Z7B1 504 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ZNF227Q86WZ6 799 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 SAMD14Q8IZD0 417 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 FAM9CQ8IZT9 166 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 OR2L13Q8N349 312 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 VWA5B2Q8N398 1253 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 SIRT6Q8N6T7 355 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 CLEC1AQ8NC01 280 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 OR8K3Q8NH51 312 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ADIPOR1Q96A54 375 aa8.39□□□□□ -1.07
HMG20A-209ENST00000559728 ELP4Q96EB1 424 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms