RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 DAZAP2Q15038 168 aaPredicted RBP11.99□□□□□ -0.49
TPM1-220ENST00000559556 NHSL2Q5HYW2 709 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 NSUN5P2Q63ZY6 315 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 TMEM198Q66K66 360 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 BICRALQ6AI39 1079 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 VASNQ6EMK4 673 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 OR52E8Q6IFG1 317 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 CYP20A1Q6UW02 462 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 CCDC91Q7Z6B0 441 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 NUDT13Q86X67 352 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 MYLK4Q86YV6 388 aaPredicted RBP11.99□□□□□ -0.49
TPM1-220ENST00000559556 PPM1NQ8N819 430 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 GOT1L1Q8NHS2 421 aaPredicted RBP11.99□□□□□ -0.49
TPM1-220ENST00000559556 WDR20Q8TBZ3 569 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 NTNG2Q96CW9 530 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 REPS1Q96D71 796 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 ANGPTL4Q9BY76 406 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 ACTR8Q9H981 624 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 WDR41Q9HAD4 459 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 CXorf21Q9HAI6 301 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 PSD3Q9NYI0 1048 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 C15orf41Q9Y2V0 281 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 NPFFR2Q9Y5X5 522 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 DNHD1Q96M86 4753 aa11.99□□□□□ -0.49
TPM1-220ENST00000559556 PLCE1Q9P212 2302 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 USF3Q68DE3 2245 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 CHD3Q12873 2000 aaKnown RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 C2orf92A0A1B0GVN3 265 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 A0A1W2PS29 197 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 MBD3L4A6NDZ8 208 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 MBD3L3A6NE82 208 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 MBD3L5A6NJ08 208 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 CD8B2A6NJW9 211 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 WASHC1A8K0Z3 465 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 FOXE1O00358 373 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 SEMA3DO95025 777 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 SNX4O95219 450 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 IL2RAP01589 272 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 ALDH18A1P54886 795 aaKnown RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 MRPS25P82663 173 aaKnown RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 SORDQ00796 357 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 FUT7Q11130 342 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 SF3B4Q15427 424 aaKnown RBP eCLIP11.98□□□□□ -0.491e-9■■□□□ 12.9
TPM1-220ENST00000559556 TMEM64Q6YI46 380 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 CAMKMTQ7Z624 323 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 ZNF615Q8N8J6 731 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 L3MBTL4Q8NA19 623 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 MBD3L2Q8NHZ7 208 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 SPPL2AQ8TCT8 520 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 KCTD4Q8WVF5 259 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 ADIPOR1Q96A54 375 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 NXNL1Q96CM4 212 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 TEX10Q9NXF1 929 aaPredicted RBP11.98□□□□□ -0.49
TPM1-220ENST00000559556 ACOT9Q9Y305 439 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 ANGPTL3Q9Y5C1 460 aa11.98□□□□□ -0.49
TPM1-220ENST00000559556 CADP27708 2225 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 A0A087X1B8 175 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 LRRC14BA6NHZ5 514 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 RAD51CO43502 376 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GOSR1O95249 250 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 CT62P0C5K7 136 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GFAPP14136 432 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 FOSL1P15407 271 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 PIK3R1P27986 724 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 STX2P32856 288 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 PIK3CGP48736 1102 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 NRG3P56975 720 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 ADAM8P78325 824 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 IRF9Q00978 393 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GTF2H2Q13888 395 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 PCBP2Q15366 365 aaKnown RBP eCLIP11.97□□□□□ -0.492e-12■■■■□ 19.4
TPM1-220ENST00000559556 CPSF6Q16630 551 aaKnown RBP eCLIP11.97□□□□□ -0.49
TPM1-220ENST00000559556 PFKFB4Q16877 469 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 FAM83EQ2M2I3 478 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 DCST1Q5T197 706 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 HLA-DQA1Q5Y7H0 255 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GTF2H2CQ6P1K8 395 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 METTL2BQ6P1Q9 378 aaKnown RBP11.97□□□□□ -0.49
TPM1-220ENST00000559556 TMEM81Q6P7N7 255 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 PACS2Q86VP3 889 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 KIF18BQ86Y91 864 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 UCN3Q969E3 161 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 TMEM41AQ96HV5 264 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 GNRHR2Q96P88 292 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 OR10A5Q9H207 317 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 IPPKQ9H8X2 491 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 JKAMPQ9P055 326 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 CAMK2AQ9UQM7 478 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 SLC6A5Q9Y345 797 aa11.97□□□□□ -0.49
TPM1-220ENST00000559556 CR1P17927 2039 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 PGRMC2O15173 223 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 CDH16O75309 829 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 TRAPPC6AO75865 159 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 ACSL3O95573 720 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 RAF1P04049 648 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 GBAP04062 536 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 EPXP11678 715 aa11.96□□□□□ -0.49
TPM1-220ENST00000559556 BMP7P18075 431 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms