RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SLC35C2Q9NQQ7 365 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 C1orf109Q9NX04 203 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 SIRT5Q9NXA8 310 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 TAS2R9Q9NYW1 312 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 EHD3Q9NZN3 535 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 CNIH4Q9P003 139 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 SLC17A7Q9P2U7 560 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 SUCOQ9UBS9 1254 aaKnown RBP4.05□□□□□ -1.76
SNX1-205ENST00000559339 B4GALT7Q9UBV7 327 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 PRODH2Q9UF12 536 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 BCAP29Q9UHQ4 241 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 ZNF223Q9UK11 482 aaPredicted RBP4.05□□□□□ -1.76
SNX1-205ENST00000559339 NPIPA1Q9UND3 350 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 OSGIN2Q9Y236 505 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 NTNG1Q9Y2I2 539 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 TMED5Q9Y3A6 229 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 FIS1Q9Y3D6 152 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 POLR3HQ9Y535 204 aaPredicted RBP4.05□□□□□ -1.76
SNX1-205ENST00000559339 DNAJC15Q9Y5T4 150 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 ACTL7BQ9Y614 415 aa4.05□□□□□ -1.76
SNX1-205ENST00000559339 SPENQ96T58 3664 aaKnown RBP4.05□□□□□ -1.76
SNX1-205ENST00000559339 ESPL1Q14674 2120 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 TNRC6AQ8NDV7 1962 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 POLEQ07864 2286 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 HRKO00198 91 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 CCL21O00585 134 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ACOX3O15254 700 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 BIRC5O15392 142 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ASNA1O43681 348 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 TYROBPO43914 113 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 HS6ST1O60243 411 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 PRKNO60260 465 aaPredicted RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 COQ9O75208 318 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 SEMA7AO75326 666 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 SNX4O95219 450 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 HSPA4LO95757 839 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 BPGMP07738 259 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FGF4P08620 206 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 IL3P08700 152 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 STSP08842 583 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FBXO45P0C2W1 286 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 LINC00032P0C843 101 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 CHN1P15882 459 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 PRPH2P23942 346 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 GRK2P25098 689 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MST1P26927 711 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MAPK1P28482 360 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 SSTR4P31391 388 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 GPC1P35052 558 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 RPL3P39023 403 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 ASMTP46597 345 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 SERPINB4P48594 390 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MASP1P48740 699 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MEOX1P50221 254 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 HTR6P50406 440 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 NR0B1P51843 470 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 TDGF1P3P51864 188 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 NCBP2P52298 156 aaKnown RBP eCLIP4.04□□□□□ -1.76
SNX1-205ENST00000559339 KCNK10P57789 538 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 GPR85P60893 370 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 PPIAP62937 165 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 MRPS22P82650 360 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 PMP22Q01453 160 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 C2orf80Q0P641 193 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MAP4K2Q12851 820 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 MAD2L1Q13257 205 aaPredicted RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 EBPQ15125 230 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 RPS6KA2Q15349 733 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ZNHIT3Q15649 155 aaPredicted RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 PRICKLE4Q2TBC4 344 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ZNF750Q32MQ0 723 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ZNF791Q3KP31 576 aaPredicted RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 GALNTL6Q49A17 601 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 VPS26BQ4G0F5 336 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ATP6AP1LQ52LC2 224 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 TRMT12Q53H54 448 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 KANK2Q63ZY3 851 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 TMEM198Q66K66 360 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 LRIG3Q6UXM1 1119 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 C16orf47Q6ZP98 133 aaPredicted RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 DGAT2L6Q6ZPD8 337 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 RNF165Q6ZSG1 346 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 R3HCC1LQ7Z5L2 792 aaKnown RBP4.04□□□□□ -1.76
SNX1-205ENST00000559339 FJX1Q86VR8 437 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 SPPL2CQ8IUH8 684 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 CCDC116Q8IYX3 515 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FAM9CQ8IZT9 166 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FAM109AQ8N4B1 249 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 AMER2Q8N7J2 671 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 GOLGA6L1Q8N7Z2 621 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ZNF321PQ8N8H1 164 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 FAM13CQ8NE31 585 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ADCY4Q8NFM4 1077 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 OR2M7Q8NG81 312 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 OR52R1Q8NGF1 315 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 OR5M3Q8NGP4 307 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 C16orf52Q8NHV5 167 aa4.04□□□□□ -1.76
SNX1-205ENST00000559339 ZFP28Q8NHY6 868 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms